/* filter/test_median.c
*
* Copyright (C) 2018 Patrick Alken
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or (at
* your option) any later version.
*
* This program is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
*/
#include <gsl/gsl_math.h>
#include <gsl/gsl_vector.h>
#include <gsl/gsl_test.h>
#include <gsl/gsl_rng.h>
#include <gsl/gsl_filter.h>
#include <gsl/gsl_movstat.h>
#include <gsl/gsl_statistics.h>
/* compute filtered data by explicitely constructing window, sorting it and finding median */
int
slow_movmedian(const gsl_filter_end_t etype, const gsl_vector * x, gsl_vector * y, const int K)
{
const size_t H = K / 2;
const size_t n = x->size;
double *window = malloc(K * sizeof(double));
size_t i;
for (i = 0; i < n; ++i)
{
size_t wsize = gsl_movstat_fill(etype, x, i, H, H, window);
double yi = gsl_stats_median(window, 1, wsize);
gsl_vector_set(y, i, yi);
}
free(window);
return GSL_SUCCESS;
}
static void
test_median_proc(const double tol, const size_t n, const size_t K,
const gsl_filter_end_t etype, gsl_rng *rng_p)
{
gsl_filter_median_workspace *w = gsl_filter_median_alloc(K);
gsl_vector *x = gsl_vector_alloc(n);
gsl_vector *y = gsl_vector_alloc(n);
gsl_vector *z = gsl_vector_alloc(n);
char buf[2048];
/* test moving median with random input */
random_vector(x, rng_p);
/* y = median(x) with slow brute force algorithm */
slow_movmedian(etype, x, y, K);
/* z = median(x) */
gsl_filter_median(etype, x, z, w);
/* test y = z */
sprintf(buf, "n=%zu K=%zu endtype=%u median random", n, K, etype);
compare_vectors(tol, z, y, buf);
/* z = median(x) in-place */
gsl_vector_memcpy(z, x);
gsl_filter_median(etype, z, z, w);
sprintf(buf, "n=%zu K=%zu endtype=%u median random in-place", n, K, etype);
compare_vectors(tol, z, y, buf);
gsl_vector_free(x);
gsl_vector_free(y);
gsl_vector_free(z);
gsl_filter_median_free(w);
}
static void
test_median(gsl_rng * rng_p)
{
test_median_proc(GSL_DBL_EPSILON, 1000, 1, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 3, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 5, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 100, 301, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 5000, 17, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 5000, 9, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 50, 901, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 50, 201, GSL_MOVSTAT_END_PADZERO, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 1, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 3, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 5, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 100, 301, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 5000, 17, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 5000, 9, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 50, 901, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 50, 201, GSL_MOVSTAT_END_PADVALUE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 1, GSL_MOVSTAT_END_TRUNCATE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 3, GSL_MOVSTAT_END_TRUNCATE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 1000, 5, GSL_MOVSTAT_END_TRUNCATE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 100, 301, GSL_MOVSTAT_END_TRUNCATE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 5000, 17, GSL_MOVSTAT_END_TRUNCATE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 5000, 9, GSL_MOVSTAT_END_TRUNCATE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 50, 901, GSL_MOVSTAT_END_TRUNCATE, rng_p);
test_median_proc(GSL_DBL_EPSILON, 50, 201, GSL_MOVSTAT_END_TRUNCATE, rng_p);
}