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/* fit/linear.c
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*
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* Copyright (C) 2000, 2007 Brian Gough
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*
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* This program is free software; you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation; either version 3 of the License, or (at
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* your option) any later version.
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*
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* This program is distributed in the hope that it will be useful, but
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* WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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* General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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*/
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#include <config.h>
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#include <gsl/gsl_errno.h>
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#include <gsl/gsl_fit.h>
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/* Fit the data (x_i, y_i) to the linear relationship
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Y = c0 + c1 x
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returning,
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c0, c1 -- coefficients
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cov00, cov01, cov11 -- variance-covariance matrix of c0 and c1,
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sumsq -- sum of squares of residuals
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This fit can be used in the case where the errors for the data are
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uknown, but assumed equal for all points. The resulting
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variance-covariance matrix estimates the error in the coefficients
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from the observed variance of the points around the best fit line.
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*/
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int
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gsl_fit_linear (const double *x, const size_t xstride,
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const double *y, const size_t ystride,
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const size_t n,
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double *c0, double *c1,
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double *cov_00, double *cov_01, double *cov_11, double *sumsq)
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{
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double m_x = 0, m_y = 0, m_dx2 = 0, m_dxdy = 0;
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size_t i;
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for (i = 0; i < n; i++)
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{
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m_x += (x[i * xstride] - m_x) / (i + 1.0);
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m_y += (y[i * ystride] - m_y) / (i + 1.0);
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}
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for (i = 0; i < n; i++)
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{
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const double dx = x[i * xstride] - m_x;
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const double dy = y[i * ystride] - m_y;
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m_dx2 += (dx * dx - m_dx2) / (i + 1.0);
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m_dxdy += (dx * dy - m_dxdy) / (i + 1.0);
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}
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/* In terms of y = a + b x */
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{
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double s2 = 0, d2 = 0;
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double b = m_dxdy / m_dx2;
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double a = m_y - m_x * b;
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*c0 = a;
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*c1 = b;
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/* Compute chi^2 = \sum (y_i - (a + b * x_i))^2 */
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for (i = 0; i < n; i++)
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{
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const double dx = x[i * xstride] - m_x;
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const double dy = y[i * ystride] - m_y;
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const double d = dy - b * dx;
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d2 += d * d;
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}
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s2 = d2 / (n - 2.0); /* chisq per degree of freedom */
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*cov_00 = s2 * (1.0 / n) * (1 + m_x * m_x / m_dx2);
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*cov_11 = s2 * 1.0 / (n * m_dx2);
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*cov_01 = s2 * (-m_x) / (n * m_dx2);
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*sumsq = d2;
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}
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return GSL_SUCCESS;
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}
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/* Fit the weighted data (x_i, w_i, y_i) to the linear relationship
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Y = c0 + c1 x
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returning,
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c0, c1 -- coefficients
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s0, s1 -- the standard deviations of c0 and c1,
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r -- the correlation coefficient between c0 and c1,
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chisq -- weighted sum of squares of residuals */
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int
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gsl_fit_wlinear (const double *x, const size_t xstride,
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const double *w, const size_t wstride,
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const double *y, const size_t ystride,
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const size_t n,
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double *c0, double *c1,
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double *cov_00, double *cov_01, double *cov_11,
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double *chisq)
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{
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/* compute the weighted means and weighted deviations from the means */
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/* wm denotes a "weighted mean", wm(f) = (sum_i w_i f_i) / (sum_i w_i) */
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double W = 0, wm_x = 0, wm_y = 0, wm_dx2 = 0, wm_dxdy = 0;
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size_t i;
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for (i = 0; i < n; i++)
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{
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const double wi = w[i * wstride];
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if (wi > 0)
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{
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W += wi;
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wm_x += (x[i * xstride] - wm_x) * (wi / W);
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wm_y += (y[i * ystride] - wm_y) * (wi / W);
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}
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}
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W = 0; /* reset the total weight */
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for (i = 0; i < n; i++)
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{
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const double wi = w[i * wstride];
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if (wi > 0)
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{
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const double dx = x[i * xstride] - wm_x;
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const double dy = y[i * ystride] - wm_y;
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W += wi;
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wm_dx2 += (dx * dx - wm_dx2) * (wi / W);
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wm_dxdy += (dx * dy - wm_dxdy) * (wi / W);
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}
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}
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/* In terms of y = a + b x */
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{
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double d2 = 0;
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double b = wm_dxdy / wm_dx2;
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double a = wm_y - wm_x * b;
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*c0 = a;
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*c1 = b;
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*cov_00 = (1 / W) * (1 + wm_x * wm_x / wm_dx2);
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*cov_11 = 1 / (W * wm_dx2);
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*cov_01 = -wm_x / (W * wm_dx2);
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/* Compute chi^2 = \sum w_i (y_i - (a + b * x_i))^2 */
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for (i = 0; i < n; i++)
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{
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const double wi = w[i * wstride];
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if (wi > 0)
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{
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const double dx = x[i * xstride] - wm_x;
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const double dy = y[i * ystride] - wm_y;
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const double d = dy - b * dx;
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d2 += wi * d * d;
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}
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}
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*chisq = d2;
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}
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return GSL_SUCCESS;
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}
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int
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gsl_fit_linear_est (const double x,
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const double c0, const double c1,
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const double cov00, const double cov01, const double cov11,
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double *y, double *y_err)
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{
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*y = c0 + c1 * x;
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*y_err = sqrt (cov00 + x * (2 * cov01 + cov11 * x));
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return GSL_SUCCESS;
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}
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int
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gsl_fit_mul (const double *x, const size_t xstride,
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const double *y, const size_t ystride,
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const size_t n,
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double *c1, double *cov_11, double *sumsq)
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{
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double m_x = 0, m_y = 0, m_dx2 = 0, m_dxdy = 0;
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size_t i;
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for (i = 0; i < n; i++)
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{
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m_x += (x[i * xstride] - m_x) / (i + 1.0);
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m_y += (y[i * ystride] - m_y) / (i + 1.0);
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}
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for (i = 0; i < n; i++)
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{
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const double dx = x[i * xstride] - m_x;
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const double dy = y[i * ystride] - m_y;
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m_dx2 += (dx * dx - m_dx2) / (i + 1.0);
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m_dxdy += (dx * dy - m_dxdy) / (i + 1.0);
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}
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/* In terms of y = b x */
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{
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double s2 = 0, d2 = 0;
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double b = (m_x * m_y + m_dxdy) / (m_x * m_x + m_dx2);
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*c1 = b;
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/* Compute chi^2 = \sum (y_i - b * x_i)^2 */
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for (i = 0; i < n; i++)
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{
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const double dx = x[i * xstride] - m_x;
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const double dy = y[i * ystride] - m_y;
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const double d = (m_y - b * m_x) + dy - b * dx;
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d2 += d * d;
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}
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s2 = d2 / (n - 1.0); /* chisq per degree of freedom */
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*cov_11 = s2 * 1.0 / (n * (m_x * m_x + m_dx2));
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*sumsq = d2;
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}
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return GSL_SUCCESS;
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}
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int
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gsl_fit_wmul (const double *x, const size_t xstride,
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const double *w, const size_t wstride,
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const double *y, const size_t ystride,
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const size_t n,
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double *c1, double *cov_11, double *chisq)
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{
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/* compute the weighted means and weighted deviations from the means */
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/* wm denotes a "weighted mean", wm(f) = (sum_i w_i f_i) / (sum_i w_i) */
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double W = 0, wm_x = 0, wm_y = 0, wm_dx2 = 0, wm_dxdy = 0;
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size_t i;
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for (i = 0; i < n; i++)
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{
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const double wi = w[i * wstride];
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if (wi > 0)
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{
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W += wi;
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wm_x += (x[i * xstride] - wm_x) * (wi / W);
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wm_y += (y[i * ystride] - wm_y) * (wi / W);
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}
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}
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W = 0; /* reset the total weight */
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for (i = 0; i < n; i++)
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{
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const double wi = w[i * wstride];
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if (wi > 0)
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{
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const double dx = x[i * xstride] - wm_x;
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const double dy = y[i * ystride] - wm_y;
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W += wi;
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wm_dx2 += (dx * dx - wm_dx2) * (wi / W);
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wm_dxdy += (dx * dy - wm_dxdy) * (wi / W);
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}
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}
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/* In terms of y = b x */
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Packit |
67cb25 |
{
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Packit |
67cb25 |
double d2 = 0;
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Packit |
67cb25 |
double b = (wm_x * wm_y + wm_dxdy) / (wm_x * wm_x + wm_dx2);
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Packit |
67cb25 |
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Packit |
67cb25 |
*c1 = b;
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Packit |
67cb25 |
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Packit |
67cb25 |
*cov_11 = 1 / (W * (wm_x * wm_x + wm_dx2));
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Packit |
67cb25 |
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Packit |
67cb25 |
/* Compute chi^2 = \sum w_i (y_i - b * x_i)^2 */
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Packit |
67cb25 |
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Packit |
67cb25 |
for (i = 0; i < n; i++)
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Packit |
67cb25 |
{
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Packit |
67cb25 |
const double wi = w[i * wstride];
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Packit |
67cb25 |
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Packit |
67cb25 |
if (wi > 0)
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Packit |
67cb25 |
{
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Packit |
67cb25 |
const double dx = x[i * xstride] - wm_x;
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Packit |
67cb25 |
const double dy = y[i * ystride] - wm_y;
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Packit |
67cb25 |
const double d = (wm_y - b * wm_x) + (dy - b * dx);
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Packit |
67cb25 |
d2 += wi * d * d;
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Packit |
67cb25 |
}
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Packit |
67cb25 |
}
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Packit |
67cb25 |
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Packit |
67cb25 |
*chisq = d2;
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Packit |
67cb25 |
}
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Packit |
67cb25 |
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Packit |
67cb25 |
return GSL_SUCCESS;
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Packit |
67cb25 |
}
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Packit |
67cb25 |
|
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Packit |
67cb25 |
int
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Packit |
67cb25 |
gsl_fit_mul_est (const double x,
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Packit |
67cb25 |
const double c1, const double cov11,
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Packit |
67cb25 |
double *y, double *y_err)
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|
Packit |
67cb25 |
{
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Packit |
67cb25 |
*y = c1 * x;
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Packit |
67cb25 |
*y_err = sqrt (cov11) * fabs (x);
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Packit |
67cb25 |
return GSL_SUCCESS;
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|
Packit |
67cb25 |
}
|