/* fit/linear.c * * Copyright (C) 2000, 2007 Brian Gough * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 3 of the License, or (at * your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. */ #include #include #include /* Fit the data (x_i, y_i) to the linear relationship Y = c0 + c1 x returning, c0, c1 -- coefficients cov00, cov01, cov11 -- variance-covariance matrix of c0 and c1, sumsq -- sum of squares of residuals This fit can be used in the case where the errors for the data are uknown, but assumed equal for all points. The resulting variance-covariance matrix estimates the error in the coefficients from the observed variance of the points around the best fit line. */ int gsl_fit_linear (const double *x, const size_t xstride, const double *y, const size_t ystride, const size_t n, double *c0, double *c1, double *cov_00, double *cov_01, double *cov_11, double *sumsq) { double m_x = 0, m_y = 0, m_dx2 = 0, m_dxdy = 0; size_t i; for (i = 0; i < n; i++) { m_x += (x[i * xstride] - m_x) / (i + 1.0); m_y += (y[i * ystride] - m_y) / (i + 1.0); } for (i = 0; i < n; i++) { const double dx = x[i * xstride] - m_x; const double dy = y[i * ystride] - m_y; m_dx2 += (dx * dx - m_dx2) / (i + 1.0); m_dxdy += (dx * dy - m_dxdy) / (i + 1.0); } /* In terms of y = a + b x */ { double s2 = 0, d2 = 0; double b = m_dxdy / m_dx2; double a = m_y - m_x * b; *c0 = a; *c1 = b; /* Compute chi^2 = \sum (y_i - (a + b * x_i))^2 */ for (i = 0; i < n; i++) { const double dx = x[i * xstride] - m_x; const double dy = y[i * ystride] - m_y; const double d = dy - b * dx; d2 += d * d; } s2 = d2 / (n - 2.0); /* chisq per degree of freedom */ *cov_00 = s2 * (1.0 / n) * (1 + m_x * m_x / m_dx2); *cov_11 = s2 * 1.0 / (n * m_dx2); *cov_01 = s2 * (-m_x) / (n * m_dx2); *sumsq = d2; } return GSL_SUCCESS; } /* Fit the weighted data (x_i, w_i, y_i) to the linear relationship Y = c0 + c1 x returning, c0, c1 -- coefficients s0, s1 -- the standard deviations of c0 and c1, r -- the correlation coefficient between c0 and c1, chisq -- weighted sum of squares of residuals */ int gsl_fit_wlinear (const double *x, const size_t xstride, const double *w, const size_t wstride, const double *y, const size_t ystride, const size_t n, double *c0, double *c1, double *cov_00, double *cov_01, double *cov_11, double *chisq) { /* compute the weighted means and weighted deviations from the means */ /* wm denotes a "weighted mean", wm(f) = (sum_i w_i f_i) / (sum_i w_i) */ double W = 0, wm_x = 0, wm_y = 0, wm_dx2 = 0, wm_dxdy = 0; size_t i; for (i = 0; i < n; i++) { const double wi = w[i * wstride]; if (wi > 0) { W += wi; wm_x += (x[i * xstride] - wm_x) * (wi / W); wm_y += (y[i * ystride] - wm_y) * (wi / W); } } W = 0; /* reset the total weight */ for (i = 0; i < n; i++) { const double wi = w[i * wstride]; if (wi > 0) { const double dx = x[i * xstride] - wm_x; const double dy = y[i * ystride] - wm_y; W += wi; wm_dx2 += (dx * dx - wm_dx2) * (wi / W); wm_dxdy += (dx * dy - wm_dxdy) * (wi / W); } } /* In terms of y = a + b x */ { double d2 = 0; double b = wm_dxdy / wm_dx2; double a = wm_y - wm_x * b; *c0 = a; *c1 = b; *cov_00 = (1 / W) * (1 + wm_x * wm_x / wm_dx2); *cov_11 = 1 / (W * wm_dx2); *cov_01 = -wm_x / (W * wm_dx2); /* Compute chi^2 = \sum w_i (y_i - (a + b * x_i))^2 */ for (i = 0; i < n; i++) { const double wi = w[i * wstride]; if (wi > 0) { const double dx = x[i * xstride] - wm_x; const double dy = y[i * ystride] - wm_y; const double d = dy - b * dx; d2 += wi * d * d; } } *chisq = d2; } return GSL_SUCCESS; } int gsl_fit_linear_est (const double x, const double c0, const double c1, const double cov00, const double cov01, const double cov11, double *y, double *y_err) { *y = c0 + c1 * x; *y_err = sqrt (cov00 + x * (2 * cov01 + cov11 * x)); return GSL_SUCCESS; } int gsl_fit_mul (const double *x, const size_t xstride, const double *y, const size_t ystride, const size_t n, double *c1, double *cov_11, double *sumsq) { double m_x = 0, m_y = 0, m_dx2 = 0, m_dxdy = 0; size_t i; for (i = 0; i < n; i++) { m_x += (x[i * xstride] - m_x) / (i + 1.0); m_y += (y[i * ystride] - m_y) / (i + 1.0); } for (i = 0; i < n; i++) { const double dx = x[i * xstride] - m_x; const double dy = y[i * ystride] - m_y; m_dx2 += (dx * dx - m_dx2) / (i + 1.0); m_dxdy += (dx * dy - m_dxdy) / (i + 1.0); } /* In terms of y = b x */ { double s2 = 0, d2 = 0; double b = (m_x * m_y + m_dxdy) / (m_x * m_x + m_dx2); *c1 = b; /* Compute chi^2 = \sum (y_i - b * x_i)^2 */ for (i = 0; i < n; i++) { const double dx = x[i * xstride] - m_x; const double dy = y[i * ystride] - m_y; const double d = (m_y - b * m_x) + dy - b * dx; d2 += d * d; } s2 = d2 / (n - 1.0); /* chisq per degree of freedom */ *cov_11 = s2 * 1.0 / (n * (m_x * m_x + m_dx2)); *sumsq = d2; } return GSL_SUCCESS; } int gsl_fit_wmul (const double *x, const size_t xstride, const double *w, const size_t wstride, const double *y, const size_t ystride, const size_t n, double *c1, double *cov_11, double *chisq) { /* compute the weighted means and weighted deviations from the means */ /* wm denotes a "weighted mean", wm(f) = (sum_i w_i f_i) / (sum_i w_i) */ double W = 0, wm_x = 0, wm_y = 0, wm_dx2 = 0, wm_dxdy = 0; size_t i; for (i = 0; i < n; i++) { const double wi = w[i * wstride]; if (wi > 0) { W += wi; wm_x += (x[i * xstride] - wm_x) * (wi / W); wm_y += (y[i * ystride] - wm_y) * (wi / W); } } W = 0; /* reset the total weight */ for (i = 0; i < n; i++) { const double wi = w[i * wstride]; if (wi > 0) { const double dx = x[i * xstride] - wm_x; const double dy = y[i * ystride] - wm_y; W += wi; wm_dx2 += (dx * dx - wm_dx2) * (wi / W); wm_dxdy += (dx * dy - wm_dxdy) * (wi / W); } } /* In terms of y = b x */ { double d2 = 0; double b = (wm_x * wm_y + wm_dxdy) / (wm_x * wm_x + wm_dx2); *c1 = b; *cov_11 = 1 / (W * (wm_x * wm_x + wm_dx2)); /* Compute chi^2 = \sum w_i (y_i - b * x_i)^2 */ for (i = 0; i < n; i++) { const double wi = w[i * wstride]; if (wi > 0) { const double dx = x[i * xstride] - wm_x; const double dy = y[i * ystride] - wm_y; const double d = (wm_y - b * wm_x) + (dy - b * dx); d2 += wi * d * d; } } *chisq = d2; } return GSL_SUCCESS; } int gsl_fit_mul_est (const double x, const double c1, const double cov11, double *y, double *y_err) { *y = c1 * x; *y_err = sqrt (cov11) * fabs (x); return GSL_SUCCESS; }