|
Packit |
67cb25 |
/* filter/test_rmedian.c
|
|
Packit |
67cb25 |
*
|
|
Packit |
67cb25 |
* Copyright (C) 2018 Patrick Alken
|
|
Packit |
67cb25 |
*
|
|
Packit |
67cb25 |
* This program is free software; you can redistribute it and/or modify
|
|
Packit |
67cb25 |
* it under the terms of the GNU General Public License as published by
|
|
Packit |
67cb25 |
* the Free Software Foundation; either version 3 of the License, or (at
|
|
Packit |
67cb25 |
* your option) any later version.
|
|
Packit |
67cb25 |
*
|
|
Packit |
67cb25 |
* This program is distributed in the hope that it will be useful, but
|
|
Packit |
67cb25 |
* WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
Packit |
67cb25 |
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
|
|
Packit |
67cb25 |
* General Public License for more details.
|
|
Packit |
67cb25 |
*
|
|
Packit |
67cb25 |
* You should have received a copy of the GNU General Public License
|
|
Packit |
67cb25 |
* along with this program; if not, write to the Free Software
|
|
Packit |
67cb25 |
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
|
|
Packit |
67cb25 |
*/
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
#include <gsl/gsl_math.h>
|
|
Packit |
67cb25 |
#include <gsl/gsl_vector.h>
|
|
Packit |
67cb25 |
#include <gsl/gsl_test.h>
|
|
Packit |
67cb25 |
#include <gsl/gsl_rng.h>
|
|
Packit |
67cb25 |
#include <gsl/gsl_randist.h>
|
|
Packit |
67cb25 |
#include <gsl/gsl_statistics.h>
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* slow/dumb rmedian which constructs actual window for each sample, sorts
|
|
Packit |
67cb25 |
* it and finds median */
|
|
Packit |
67cb25 |
static int
|
|
Packit |
67cb25 |
slow_rmedian(const gsl_filter_end_t endtype, const gsl_vector * x, gsl_vector * y, const int K)
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
const int n = (int) x->size;
|
|
Packit |
67cb25 |
const int H = K / 2;
|
|
Packit |
67cb25 |
double *window = malloc(K * sizeof(double));
|
|
Packit |
67cb25 |
int i;
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
for (i = 0; i < n; ++i)
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
size_t wsize = gsl_movstat_fill(endtype, x, i, H, H, window);
|
|
Packit |
67cb25 |
double yi;
|
|
Packit |
67cb25 |
int j;
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* fill first half of window with previous filter output values */
|
|
Packit |
67cb25 |
for (j = i - H; j < i; ++j)
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
if (j < 0)
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
if (endtype == GSL_FILTER_END_PADVALUE)
|
|
Packit |
67cb25 |
window[j - i + H] = gsl_vector_get(x, 0);
|
|
Packit |
67cb25 |
else if (endtype == GSL_FILTER_END_PADZERO)
|
|
Packit |
67cb25 |
window[j - i + H] = 0.0;
|
|
Packit |
67cb25 |
}
|
|
Packit |
67cb25 |
else
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
window[j - i + H] = gsl_vector_get(y, j);
|
|
Packit |
67cb25 |
}
|
|
Packit |
67cb25 |
}
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
yi = gsl_stats_median(window, 1, wsize);
|
|
Packit |
67cb25 |
gsl_vector_set(y, i, yi);
|
|
Packit |
67cb25 |
}
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
free(window);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
return GSL_SUCCESS;
|
|
Packit |
67cb25 |
}
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* test square wave input (root signal) */
|
|
Packit |
67cb25 |
static void
|
|
Packit |
67cb25 |
test_rmedian_root(const gsl_filter_end_t etype, const size_t n, const size_t k)
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
const double tol = 1.0e-12;
|
|
Packit |
67cb25 |
gsl_filter_rmedian_workspace *w = gsl_filter_rmedian_alloc(k);
|
|
Packit |
67cb25 |
gsl_vector *x = gsl_vector_alloc(n);
|
|
Packit |
67cb25 |
gsl_vector *y = gsl_vector_alloc(n);
|
|
Packit |
67cb25 |
char buf[2048];
|
|
Packit |
67cb25 |
size_t i;
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* test a root sequence (square input): x = [zero one zero] */
|
|
Packit |
67cb25 |
gsl_vector_set_all(x, 0.0);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
for (i = n / 3; i <= n / 2; ++i)
|
|
Packit |
67cb25 |
gsl_vector_set(x, i, 1.0);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* compute y = rmedian(x) and test y = x */
|
|
Packit |
67cb25 |
gsl_filter_rmedian(etype, x, y, w);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
sprintf(buf, "n=%zu k=%zu RMF square wave root sequence", n, k);
|
|
Packit |
67cb25 |
compare_vectors(tol, y, x, buf);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
gsl_vector_free(x);
|
|
Packit |
67cb25 |
gsl_vector_free(y);
|
|
Packit |
67cb25 |
gsl_filter_rmedian_free(w);
|
|
Packit |
67cb25 |
}
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* test random input and in-place */
|
|
Packit |
67cb25 |
static void
|
|
Packit |
67cb25 |
test_rmedian_random(const gsl_filter_end_t etype, const size_t n, const int K, gsl_rng * r)
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
const double tol = 1.0e-12;
|
|
Packit |
67cb25 |
gsl_filter_rmedian_workspace *w = gsl_filter_rmedian_alloc(K);
|
|
Packit |
67cb25 |
gsl_vector *x = gsl_vector_alloc(n);
|
|
Packit |
67cb25 |
gsl_vector *y = gsl_vector_alloc(n);
|
|
Packit |
67cb25 |
gsl_vector *z = gsl_vector_alloc(n);
|
|
Packit |
67cb25 |
char buf[2048];
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* test filter with random input against slow algorithm */
|
|
Packit |
67cb25 |
random_vector(x, r);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* y = rmedian(x) */
|
|
Packit |
67cb25 |
gsl_filter_rmedian(etype, x, y, w);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* y = rmedian(x) with slow algorithm */
|
|
Packit |
67cb25 |
slow_rmedian(etype, x, z, K);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* test y = z */
|
|
Packit |
67cb25 |
sprintf(buf, "n=%zu K=%d RMF symmetric random slow test", n, K);
|
|
Packit |
67cb25 |
compare_vectors(tol, y, z, buf);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* test in-place filter */
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* z = rmedian(x) in-place */
|
|
Packit |
67cb25 |
gsl_vector_memcpy(z, x);
|
|
Packit |
67cb25 |
gsl_filter_rmedian(etype, z, z, w);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
sprintf(buf, "n=%zu K=%d RMF symmetric random in-place", n, K);
|
|
Packit |
67cb25 |
compare_vectors(tol, z, y, buf);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
gsl_vector_free(x);
|
|
Packit |
67cb25 |
gsl_vector_free(y);
|
|
Packit |
67cb25 |
gsl_vector_free(z);
|
|
Packit |
67cb25 |
gsl_filter_rmedian_free(w);
|
|
Packit |
67cb25 |
}
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
void
|
|
Packit |
67cb25 |
test_rmedian(gsl_rng * rng_p)
|
|
Packit |
67cb25 |
{
|
|
Packit |
67cb25 |
/* test root sequences */
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
test_rmedian_root(GSL_FILTER_END_PADZERO, 1000, 3);
|
|
Packit |
67cb25 |
test_rmedian_root(GSL_FILTER_END_PADZERO, 2000, 101);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
test_rmedian_root(GSL_FILTER_END_PADVALUE, 1000, 3);
|
|
Packit |
67cb25 |
test_rmedian_root(GSL_FILTER_END_PADVALUE, 2000, 101);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
/* test random input */
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADZERO, 10, 1, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADZERO, 100, 3, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADZERO, 1000, 3, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADZERO, 100, 1001, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADZERO, 5, 7, rng_p);
|
|
Packit |
67cb25 |
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADVALUE, 10, 1, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADVALUE, 100, 3, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADVALUE, 1000, 3, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADVALUE, 100, 1001, rng_p);
|
|
Packit |
67cb25 |
test_rmedian_random(GSL_FILTER_END_PADVALUE, 5, 7, rng_p);
|
|
Packit |
67cb25 |
}
|