/* filter/test_rmedian.c * * Copyright (C) 2018 Patrick Alken * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 3 of the License, or (at * your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. */ #include #include #include #include #include #include /* slow/dumb rmedian which constructs actual window for each sample, sorts * it and finds median */ static int slow_rmedian(const gsl_filter_end_t endtype, const gsl_vector * x, gsl_vector * y, const int K) { const int n = (int) x->size; const int H = K / 2; double *window = malloc(K * sizeof(double)); int i; for (i = 0; i < n; ++i) { size_t wsize = gsl_movstat_fill(endtype, x, i, H, H, window); double yi; int j; /* fill first half of window with previous filter output values */ for (j = i - H; j < i; ++j) { if (j < 0) { if (endtype == GSL_FILTER_END_PADVALUE) window[j - i + H] = gsl_vector_get(x, 0); else if (endtype == GSL_FILTER_END_PADZERO) window[j - i + H] = 0.0; } else { window[j - i + H] = gsl_vector_get(y, j); } } yi = gsl_stats_median(window, 1, wsize); gsl_vector_set(y, i, yi); } free(window); return GSL_SUCCESS; } /* test square wave input (root signal) */ static void test_rmedian_root(const gsl_filter_end_t etype, const size_t n, const size_t k) { const double tol = 1.0e-12; gsl_filter_rmedian_workspace *w = gsl_filter_rmedian_alloc(k); gsl_vector *x = gsl_vector_alloc(n); gsl_vector *y = gsl_vector_alloc(n); char buf[2048]; size_t i; /* test a root sequence (square input): x = [zero one zero] */ gsl_vector_set_all(x, 0.0); for (i = n / 3; i <= n / 2; ++i) gsl_vector_set(x, i, 1.0); /* compute y = rmedian(x) and test y = x */ gsl_filter_rmedian(etype, x, y, w); sprintf(buf, "n=%zu k=%zu RMF square wave root sequence", n, k); compare_vectors(tol, y, x, buf); gsl_vector_free(x); gsl_vector_free(y); gsl_filter_rmedian_free(w); } /* test random input and in-place */ static void test_rmedian_random(const gsl_filter_end_t etype, const size_t n, const int K, gsl_rng * r) { const double tol = 1.0e-12; gsl_filter_rmedian_workspace *w = gsl_filter_rmedian_alloc(K); gsl_vector *x = gsl_vector_alloc(n); gsl_vector *y = gsl_vector_alloc(n); gsl_vector *z = gsl_vector_alloc(n); char buf[2048]; /* test filter with random input against slow algorithm */ random_vector(x, r); /* y = rmedian(x) */ gsl_filter_rmedian(etype, x, y, w); /* y = rmedian(x) with slow algorithm */ slow_rmedian(etype, x, z, K); /* test y = z */ sprintf(buf, "n=%zu K=%d RMF symmetric random slow test", n, K); compare_vectors(tol, y, z, buf); /* test in-place filter */ /* z = rmedian(x) in-place */ gsl_vector_memcpy(z, x); gsl_filter_rmedian(etype, z, z, w); sprintf(buf, "n=%zu K=%d RMF symmetric random in-place", n, K); compare_vectors(tol, z, y, buf); gsl_vector_free(x); gsl_vector_free(y); gsl_vector_free(z); gsl_filter_rmedian_free(w); } void test_rmedian(gsl_rng * rng_p) { /* test root sequences */ test_rmedian_root(GSL_FILTER_END_PADZERO, 1000, 3); test_rmedian_root(GSL_FILTER_END_PADZERO, 2000, 101); test_rmedian_root(GSL_FILTER_END_PADVALUE, 1000, 3); test_rmedian_root(GSL_FILTER_END_PADVALUE, 2000, 101); /* test random input */ test_rmedian_random(GSL_FILTER_END_PADZERO, 10, 1, rng_p); test_rmedian_random(GSL_FILTER_END_PADZERO, 100, 3, rng_p); test_rmedian_random(GSL_FILTER_END_PADZERO, 1000, 3, rng_p); test_rmedian_random(GSL_FILTER_END_PADZERO, 100, 1001, rng_p); test_rmedian_random(GSL_FILTER_END_PADZERO, 5, 7, rng_p); test_rmedian_random(GSL_FILTER_END_PADVALUE, 10, 1, rng_p); test_rmedian_random(GSL_FILTER_END_PADVALUE, 100, 3, rng_p); test_rmedian_random(GSL_FILTER_END_PADVALUE, 1000, 3, rng_p); test_rmedian_random(GSL_FILTER_END_PADVALUE, 100, 1001, rng_p); test_rmedian_random(GSL_FILTER_END_PADVALUE, 5, 7, rng_p); }