// -*- mode: c++; c-basic-offset:4 -*-
// This file is part of libdap, A C++ implementation of the OPeNDAP Data
// Access Protocol.
// Copyright (c) 2002,2003 OPeNDAP, Inc.
// Author: James Gallagher <jgallagher@opendap.org>
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
//
// You can contact OPeNDAP, Inc. at PO Box 112, Saunderstown, RI. 02874-0112.
// (c) COPYRIGHT URI/MIT 1994-1999
// Please read the full copyright statement in the file COPYRIGHT_URI.
//
// Authors:
// jhrg,jimg James Gallagher <jgallagher@gso.uri.edu>
// Implementation for Array.
//
// jhrg 9/13/94
#include "config.h"
// #define DODS_DEBUG
#include <algorithm>
#include <functional>
#include <sstream>
#include "Array.h"
#include "Grid.h"
#include "D4Attributes.h"
#include "DMR.h"
#include "D4Dimensions.h"
#include "D4Maps.h"
#include "D4Group.h"
#include "D4EnumDefs.h"
#include "D4Enum.h"
#include "XMLWriter.h"
#include "util.h"
#include "debug.h"
#include "InternalErr.h"
#include "escaping.h"
using namespace std;
namespace libdap {
Array::dimension::dimension(D4Dimension *d) : dim(d), use_sdim_for_slice(true)
{
size = d->size();
name = d->name();
start = 0;
stop = size - 1;
stride = 1;
c_size = size;
}
void
Array::_duplicate(const Array &a)
{
_shape = a._shape;
// Deep copy the Maps if they are being used.
if (a.d_maps) {
d_maps = new D4Maps(*(a.d_maps));
}
else {
d_maps = 0;
}
// d_maps = a.d_maps ? new D4Maps(*(a.d_maps)) : 0;
}
// The first method of calculating length works when only one dimension is
// constrained and you want the others to appear in total. This is important
// when selecting from grids since users may not select from all dimensions
// in which case that means they want the whole thing. Array projection
// should probably work this way too, but it doesn't. 9/21/2001 jhrg
/** @deprecated Calling this method should never be necessary. It is used
internally called whenever the size of the Array is changed, e.g., by a
constraint.
Changes the length property of the array.
*/
void
Array::update_length(int)
{
int length = 1;
for (Dim_citer i = _shape.begin(); i != _shape.end(); i++) {
#if 0
// If the size of any dimension is zero, then the array is not
// capable of storing any values. jhrg 1/28/16
length *= (*i).c_size > 0 ? (*i).c_size : 1;
#endif
length *= (*i).c_size;
}
set_length(length);
}
// Construct an instance of Array. The (BaseType *) is assumed to be
// allocated using new - The dtor for Vector will delete this object.
/** Build an array with a name and an element type. The name may be omitted,
which will create a nameless variable. The template (element type) pointer
may also be omitted, but if it is omitted when the Array is created, it
\e must be added (with \c add_var()) before \c read() or \c deserialize()
is called.
@todo Force the Array::add_var() method to be used to add \e v.
This version of add_var() calls Vector::add_var().
@param n A string containing the name of the variable to be
created.
@param v A pointer to a variable of the type to be included
in the Array. May be null and set later using add_var() or add_var_nocopy()
@brief Array constructor
*/
Array::Array(const string &n, BaseType *v, bool is_dap4 /* default:false */)
: Vector(n, 0, dods_array_c, is_dap4), d_maps(0)
{
add_var(v); // Vector::add_var() stores null if v is null
}
/** Build an array on the server-side with a name, a dataset name from which
this Array is being created, and an element type.
@todo Force the Array::add_var() method to be used to add \e v.
This version of add_var() calls Vector::add_var().
@param n A string containing the name of the variable to be created.
@param d A string containing the name of the dataset from which this
variable is being created.
@param v A pointer to a variable of the type to be included
in the Array.
@brief Array constructor
*/
Array::Array(const string &n, const string &d, BaseType *v, bool is_dap4 /* default:false */)
: Vector(n, d, 0, dods_array_c, is_dap4), d_maps(0)
{
add_var(v); // Vector::add_var() stores null if v is null
}
/** @brief The Array copy constructor. */
Array::Array(const Array &rhs) : Vector(rhs)
{
_duplicate(rhs);
}
/** @brief The Array destructor. */
Array::~Array()
{
delete d_maps;
}
BaseType *
Array::ptr_duplicate()
{
return new Array(*this);
}
Array &
Array::operator=(const Array &rhs)
{
if (this == &rhs)
return *this;
dynamic_cast<Vector &>(*this) = rhs;
_duplicate(rhs);
return *this;
}
void
Array::transform_to_dap4(D4Group *root, Constructor *container)
{
DBG(cerr << __func__ << "() - BEGIN (array:" << name() << ")" << endl;);
Array *dest = static_cast<Array*>(ptr_duplicate());
// If it's already a DAP4 object then we can just return it!
if(is_dap4()){
DBG(cerr << __func__ << "() - Already DAP4 type: Just making a copy and adding to container. " << endl;);
container->add_var_nocopy(dest);
DBG(cerr << __func__ << "() - END (Already DAP4 type)" << endl;);
}
// Process the Array's dimensions, making D4 shared dimensions for
// D2 dimensions that are named. If there is just a size, don't make
// a D4Dimension (In DAP4 you cannot share a dimension unless it has
// a name). jhrg 3/18/14
D4Dimensions *root_dims = root->dims();
for (Array::Dim_iter dap2_dim = dest->dim_begin(), e = dest->dim_end(); dap2_dim != e; ++dap2_dim) {
if (!(*dap2_dim).name.empty()) {
DBG(cerr << __func__ << "() - Processing the array dimension '" << (*dap2_dim).name << "'" << endl;);
// If a D4Dimension with the name already exists, use it.
D4Dimension *d4_dim = root_dims->find_dim((*dap2_dim).name);
if (!d4_dim) {
d4_dim = new D4Dimension((*dap2_dim).name, (*dap2_dim).size);
root_dims->add_dim_nocopy(d4_dim);
DBG(cerr << __func__ << "() -" <<
" Added NEW D4Dimension '"<< d4_dim->name() << "' (" <<
(void *)d4_dim << ") to root->dims()"<< endl;);
}
else {
DBG(cerr << __func__ << "() -" <<
" Using Existing D4Dimension '"<< d4_dim->name() << "' (" <<
(void *)d4_dim << ")"<< endl;);
if (d4_dim->size() != (unsigned long) (*dap2_dim).size) {
// TODO Revisit this decision. jhrg 3/18/14
// ...in case the name/size are different, make a unique D4Dimension
// but don't fiddle with the name. Not sure I like this idea, so I'm
// making the case explicit (could be rolled in to the block above).
// jhrg 3/18/14
//
// This is causing problems in the FITS handler because there are cases
// where two arrays have dimensions with the same name but different
// sizes. The deserializing code is using the first size listed, which is
// wrong in some cases. I'm going to try making this new D4Dimension using
// the dim name along with the variable name. jhrg 8/15/14
d4_dim = new D4Dimension((*dap2_dim).name + "_" + name(), (*dap2_dim).size);
DBG(cerr << __func__ << "() -" <<
" Utilizing Name/Size Conflict Naming Artifice. name'"<< d4_dim->name() << "' (" <<
(void *)d4_dim << ")"<< endl;);
root_dims->add_dim_nocopy(d4_dim);
}
}
// At this point d4_dim's name and size == those of (*d) so just set
// the D4Dimension pointer so it matches the one in the D4Group.
(*dap2_dim).dim = d4_dim;
}
}
// Copy the D2 attributes to D4 Attributes
dest->attributes()->transform_to_dap4(get_attr_table());
dest->set_is_dap4(true);
container->add_var_nocopy(dest);
DBG(cerr << __func__ << "() - END (array:" << name() << ")" << endl;);
}
bool Array::is_dap2_grid(){
bool is_grid = false;
if(this->is_dap4()){
DBG( cerr << __func__ << "() - Array '"<< name() << "' is DAP4 object!" << endl;)
D4Maps *d4_maps = this->maps();
is_grid = d4_maps->size(); // It can't be a grid if there are no maps...
if(is_grid){
DBG( cerr << __func__ << "() - Array '"<< name() << "' has D4Maps." << endl;)
// hmmm this might be a DAP2 Grid...
D4Maps::D4MapsIter i = d4_maps->map_begin();
D4Maps::D4MapsIter e = d4_maps->map_end();
while(i!=e){
DBG( cerr << __func__ << "() - Map '"<< (*i)->array()->name() << " has " << (*i)->array()->_shape.size() << " dimension(s)." << endl;)
if((*i)->array()->_shape.size() > 1){
is_grid = false;
i = e;
}
else {
i++;
}
}
}
else {
DBG( cerr << __func__ << "() - Array '"<< name() << "' has no D4Maps." << endl;)
}
}
DBG( cerr << __func__ << "() - is_grid: "<< (is_grid?"true":"false") << endl;)
return is_grid;
}
/**
* @brief Transforms this instance of a D4Array into the corresponding DAP2 object.
*
* This transformation may return an Array or a Grid object. The DAP2 Grid construct
* is semantically contained in the DAP4 concept of arrays with Map arrays. If all
* of the Maps are one dimensional then the D4Array can be represented as a
* Grid object.
*
* @param The AttrTable pointer parent_attr_table is used by Groups, which disappear
* from the DAP2 representation. Their children are returned in the the BAseType vector
* their attributes are added to parent_attr_table.
* @return A pointer to a vector of BaseType pointers (right?). In this D4Array case
* returned vector may contain a DAP2 Array or a Grid. Or, if the Array' prototype is
* a type that cannot be represented in DAP2 the return will be NULL.
*/
std::vector<BaseType *> *
Array::transform_to_dap2(AttrTable *){
DBG(cerr << __func__ << "() - BEGIN Array '"<< name() << "'" << endl;);
BaseType *dest;
if(is_dap4()){ // Don't convert a DAP2 thing
// Can Precious be represented as a DAP2 Grid
if(is_dap2_grid()){
// Oh yay! Grids are special.
DBG(cerr << __func__ << "() - Array '"<< name() << "' is dap2 Grid!" << endl;);
Grid *g = new Grid(name());
dest = g;
Array *grid_array = (Array *) this->ptr_duplicate();
g->set_array(grid_array);
// Get the metadata into the Grid
AttrTable *grid_attrs = attributes()->get_AttrTable(name());
g->set_attr_table(*grid_attrs); // Copy it into the Grid object.
// grid_array->set_attr_table(*grid_attrs); // Copy it into the data Array.
delete grid_attrs;
// Clear the Grid data Array attributes.
AttrTable at;
at.set_name(name());
grid_array->set_attr_table(at);
// Process the Map Arrays.
D4Maps *d4_maps = this->maps();
vector<BaseType *> dropped_maps;
D4Maps::D4MapsIter miter = d4_maps->map_begin();
D4Maps::D4MapsIter end = d4_maps->map_end();
for( ; miter!=end; miter++){
D4Map *d4_map = (*miter);
Array *d4_map_array = const_cast<Array*>(d4_map->array());
vector<BaseType *> *d2_result = d4_map_array->transform_to_dap2(&(g->get_attr_table()));
if(d2_result){
if(d2_result->size()>1)
throw Error(internal_error,string(__func__)+"() - ERROR: D4Map Array conversion resulted in multiple DAP2 objects.");
// TODO - This is probably slow and needs a better pattern. const_cast? static_cast?
Array *d2_map_array = dynamic_cast<Array *>((*d2_result)[0]);
if(d2_map_array){
if(d2_map_array->dimensions()!=1)
throw Error(internal_error,string(__func__)+"() - ERROR: DAP2 array from D4Map Array conversion has more than 1 dimension.");
g->add_map(d2_map_array,false);
AttrTable at = d2_map_array->get_attr_table();
DBG( cerr << __func__ << "() - " <<
"DAS For Grid Map '" << d2_map_array->name() << "':" << endl;
at.print(cerr); );
}
else {
throw Error(internal_error,string(__func__)+"() - Unable to interpret returned DAP2 content.");
}
delete d2_result;
}
else {
dropped_maps.push_back(d4_map_array);
}
}
// Did we have a transform failure?
if(!dropped_maps.empty()){
// Yup... tell the story in the attributes.
AttrTable *dv_table = Constructor::make_dropped_vars_attr_table(&dropped_maps);
dest->get_attr_table().append_container(dv_table,dv_table->get_name());
}
}
else {
// It's not a Grid so we can make a simple copy of our Precious.
DBG( cerr << __func__ << "() - Array '"<< name() << "' is not a Grid!" << endl);
BaseType *proto = this->prototype();
switch(proto->type()){
case dods_int64_c:
case dods_uint64_c:
case dods_enum_c:
case dods_opaque_c:
{
// For now we punt on these type as they have no easy representation in
// the DAP2 data model. By setting this to NULL we cause the Array to be
// dropped and this will be reflected in the metadata (DAS).
dest = NULL;
break;
}
default:
{
dest = this->ptr_duplicate();
// convert the d4 attributes to a dap2 attribute table.
AttrTable *attrs = this->attributes()->get_AttrTable(name());
dest->set_attr_table(*attrs);
dest->set_is_dap4(false);
AttrTable at = dest->get_attr_table();
DBG( cerr << __func__ << "() - " <<
"DAS for new Array '" << dest->name() << "':" << endl;
at.print(cerr); )
break;
}
}
}
}
else {
// If it's a DAP2 Array already then we just make a copy of our Precious.
dest = this->ptr_duplicate();
}
// attrs->print(cerr,"",true);
vector<BaseType *> *result;
if(dest){
result = new vector<BaseType *>();
result->push_back(dest);
}
else {
result = NULL;
}
DBG( cerr << __func__ << "() - END Array '"<< name() << "'" << endl;);
return result;
}
/**
* Hackery that helps build a new D4Group from an old one. We need to re-wire the
* D4Dimension (note the lack of an 's' at then end) that the copied Array objects
* hold. This code does that. Note that these are 'weak pointers' so they should
* never be freed - the D4Group object will take care of that.
*
* @note The order of the D4Dimension instances matches in 'old_dims' and 'new_dims'.
*
* @param old_dims The Old D4Dimension objects (held in a D4Dimensions instance)
* @param new_dims The New D4Dimension objects.
*/
void
Array::update_dimension_pointers(D4Dimensions *old_dims, D4Dimensions *new_dims)
{
std::vector<dimension>::iterator i = _shape.begin(), e = _shape.end();
while (i != e) {
D4Dimensions::D4DimensionsIter old_i = old_dims->dim_begin(), old_e = old_dims->dim_end();
while (old_i != old_e) {
if ((*i).dim == *old_i) {
(*i).dim = new_dims->find_dim((*old_i)->name());
}
++old_i;
}
++i;
}
}
/** @brief Add the BaseType pointer to this constructor type
instance.
Propagate the name of the BaseType instance to this instance. This
ensures that variables at any given level of the DDS table have
unique names (i.e., that Arrays do not have their default name ""). If
<tt>v</tt>'s name is null, then assume that the array \e is named and
don't overwrite it with <tt>v</tt>'s null name.
@note It is possible for the BaseType pointer to be null when this
method is called, a behavior that differs considerably from that of
the other 'add_var()' methods.
@note This version checks to see if \e v is an array. If so, it calls
Vector::add_var() using the template variable of \e v and then appends
the dimensions of \e v to this array. This somewhat obscure behavior
simplifies 'translating' Sequences to arrays when the actual variable
being translated is not a regular Sequence but an array of Sequences.
This is of very debatable usefulness, but it's here all the same.
@param v The template variable for the array
@param p The Part parameter defaults to nil and is ignored by this method.
*/
void
Array::add_var(BaseType *v, Part)
{
// If 'v' is an Array, add the template instance to this object and
// then copy the dimension information. Odd semantics; I wonder if this
//is ever used. jhrg 6/13/12
if (v && v->type() == dods_array_c) {
Array *a = static_cast<Array*>(v);
Vector::add_var(a->var());
Dim_iter i = a->dim_begin();
Dim_iter i_end = a->dim_end();
while (i != i_end) {
append_dim(a->dimension_size(i), a->dimension_name(i));
++i;
}
}
else {
Vector::add_var(v);
}
}
void
Array::add_var_nocopy(BaseType *v, Part)
{
// If 'v' is an Array, add the template instance to this object and
// then copy the dimension information. Odd semantics; I wonder if this
//is ever used. jhrg 6/13/12
if (v && v->type() == dods_array_c) {
Array &a = dynamic_cast<Array&>(*v);
Vector::add_var_nocopy(a.var());
Dim_iter i = a.dim_begin();
Dim_iter i_end = a.dim_end();
while (i != i_end) {
append_dim(a.dimension_size(i), a.dimension_name(i));
++i;
}
}
else {
Vector::add_var_nocopy(v);
}
}
/** Given a size and a name, this function adds a dimension to the
array. For example, if the Array is already 10 elements long,
calling <tt>append_dim</tt> with a size of 5 will transform the array
into a 10x5 matrix. Calling it again with a size of 2 will
create a 10x5x2 array, and so on. This sets Vector's length
member as a side effect.
@param size The size of the desired new row.
@param name The name of the new dimension. This defaults to
an empty string.
@brief Add a dimension of a given size. */
void
Array::append_dim(int size, const string &name)
{
dimension d(size, www2id(name));
_shape.push_back(d);
update_length();
}
void
Array::append_dim(D4Dimension *dim)
{
dimension d(/*dim->size(), www2id(dim->name()),*/ dim);
_shape.push_back(d);
update_length();
}
/** Creates a new OUTER dimension (slowest varying in rowmajor)
* for the array by prepending rather than appending it.
* @param size cardinality of the new dimension
* @param name optional name for the new dimension
*/
void
Array::prepend_dim(int size, const string& name/* = "" */)
{
dimension d(size, www2id(name));
// Shifts the whole array, but it's tiny in general
_shape.insert(_shape.begin(), d);
update_length(); // the number is ignored...
}
void
Array::prepend_dim(D4Dimension *dim)
{
dimension d(/*dim->size(), www2id(dim->name()),*/ dim);
// Shifts the whole array, but it's tiny in general
_shape.insert(_shape.begin(), d);
update_length(); // the number is ignored...
}
/** Remove all the dimensions currently set for the Array. This also
* removes all constraint information.
*/
void
Array::clear_all_dims()
{
_shape.clear();
}
/** Resets the dimension constraint information so that the entire
array is selected.
@brief Reset constraint to select entire array.
*/
void
Array::reset_constraint()
{
set_length(-1);
for (Dim_iter i = _shape.begin(); i != _shape.end(); i++) {
(*i).start = 0;
(*i).stop = (*i).size - 1;
(*i).stride = 1;
(*i).c_size = (*i).size;
update_length();
}
}
/** Tell the Array object to clear the constraint information about
dimensions. Do this <i>once</i> before calling <tt>add_constraint()</tt>
for each new constraint expression. Only the dimensions explicitly
selected using <tt>add_constraint()</tt> will be sent.
@deprecated This should never be used.
@brief Clears the projection; add each projected dimension explicitly using
<tt>add_constraint</tt>.
*/
void
Array::clear_constraint()
{
reset_constraint();
}
// Note: MS VC++ won't tolerate embedded newlines in strings, hence the \n
// is explicit.
static const char *array_sss = \
"Invalid constraint parameters: At least one of the start, stride or stop \n\
specified do not match the array variable.";
/** Once a dimension has been created (see append_dim()), it can
be constrained. This will make the array appear to the rest
of the world to be smaller than it is. This functions sets the
projection for a dimension, and marks that dimension as part of the
current projection.
@note A stride value <= 0 or > the array size is an error and causes
add_constraint to throw an Error. Similarly, start or stop values >
size also cause an Error exception to be thrown.
@brief Adds a constraint to an Array dimension.
@param i An iterator pointing to the dimension in the list of
dimensions.
@param start The start index of the constraint.
@param stride The stride value of the constraint.
@param stop The stop index of the constraint. A value of -1 indicates
'to the end' of the array.
@exception Error Thrown if the any of values of start, stop or stride
cannot be applied to this array. */
void
Array::add_constraint(Dim_iter i, int start, int stride, int stop)
{
dimension &d = *i ;
// if stop is -1, set it to the array's max element index
// jhrg 12/20/12
if (stop == -1)
stop = d.size - 1;
// Check for bad constraints.
// Jose Garcia
// Usually invalid data for a constraint is the user's mistake
// because they build a wrong URL in the client side.
if (start >= d.size || stop >= d.size || stride > d.size || stride <= 0)
throw Error(malformed_expr, array_sss);
if (((stop - start) / stride + 1) > d.size)
throw Error(malformed_expr, array_sss);
d.start = start;
d.stop = stop;
d.stride = stride;
d.c_size = (stop - start) / stride + 1;
DBG(cerr << "add_constraint: c_size = " << d.c_size << endl);
update_length();
d.use_sdim_for_slice = false;
}
void
Array::add_constraint(Dim_iter i, D4Dimension *dim)
{
dimension &d = *i ;
if (dim->constrained())
add_constraint(i, dim->c_start(), dim->c_stride(), dim->c_stop());
dim->set_used_by_projected_var(true);
// In this case the value below overrides the value for use_sdim_for_slice
// set in the above call. jhrg 12/20/13
d.use_sdim_for_slice = true;
}
/** Returns an iterator to the first dimension of the Array. */
Array::Dim_iter
Array::dim_begin()
{
return _shape.begin() ;
}
/** Returns an iterator past the last dimension of the Array. */
Array::Dim_iter
Array::dim_end()
{
return _shape.end() ;
}
//TODO Many of these methods take a bool parameter that serves no use; remove.
/** Return the total number of dimensions contained in the array.
When <i>constrained</i> is TRUE, return the number of dimensions
given the most recently evaluated constraint expression.
@brief Return the total number of dimensions in the array.
@param constrained A boolean flag to indicate whether the array is
constrained or not. Ignored.
*/
unsigned int
Array::dimensions(bool /*constrained*/)
{
return _shape.size();
}
/** Return the size of the array dimension referred to by <i>i</i>.
If the dimension is constrained the constrained size is returned if
<i>constrained</i> is \c true.
@brief Returns the size of the dimension.
@param i The dimension.
@param constrained If this parameter is TRUE, the method returns the
constrained size of the array so long as a constraint has been applied to
this dimension. If TRUE and no constraint has been applied, this method
returns zero. If it is FALSE, the method ignores any constraint that
has been applied to this dimension and returns the full size of the
dimension. The default value is FALSE.
@return An integer containing the size of the specified dimension.
*/
int
Array::dimension_size(Dim_iter i, bool constrained)
{
int size = 0;
if (!_shape.empty()) {
if (constrained)
size = (*i).c_size;
else
size = (*i).size;
}
return size;
}
/** Use this function to return the start index of an array
dimension. If the array is constrained (indicated with the
<i>constrained</i> argument), the start index of the constrained
array is returned (or zero if the dimension in question is not
selected at all). See also <tt>dimension_stop()</tt> and
<tt>dimension_stride()</tt>.
@brief Return the start index of a dimension.
@param i The dimension.
@param constrained If this parameter is TRUE, the function
returns the start index only if the dimension is constrained
(subject to a start, stop, or stride constraint). If
the dimension is not constrained, the function returns zero. If it
is FALSE, the function returns the start index whether or not
the dimension is constrained.
@return The desired start index.
*/
int
Array::dimension_start(Dim_iter i, bool /*constrained*/)
{
return (!_shape.empty()) ? (*i).start : 0;
}
/** Use this function to return the stop index of an array
dimension. If the array is constrained (indicated with the
<i>constrained</i> argument), the stop index of the constrained
array is returned (or zero if the dimension in question is not
selected at all). See also <tt>dimension_start()</tt> and
<tt>dimension_stride()</tt>.
@brief Return the stop index of the constraint.
@param i The dimension.
@param constrained If this parameter is TRUE, the function
returns the stop index only if the dimension is constrained
(subject to a start, stop, or stride constraint). If
the dimension is not constrained, the function returns zero. If it
is FALSE, the function returns the stop index whether or not
the dimension is constrained.
@return The desired stop index.
*/
int
Array::dimension_stop(Dim_iter i, bool /*constrained*/)
{
return (!_shape.empty()) ? (*i).stop : 0;
}
/** Use this function to return the stride value of an array
dimension. If the array is constrained (indicated with the
<i>constrained</i> argument), the stride value of the constrained
array is returned (or zero if the dimension in question is not
selected at all). See also <tt>dimension_stop()</tt> and
<tt>dimension_start()</tt>.
@brief Returns the stride value of the constraint.
@param i The dimension.
@param constrained If this parameter is TRUE, the function
returns the stride value only if the dimension is constrained
(subject to a start, stop, or stride constraint). If
the dimension is not constrained, the function returns zero. If it
is FALSE, the function returns the stride value whether or not
the dimension is constrained.
@return The stride value requested, or zero, if <i>constrained</i>
is TRUE and the dimension is not selected.
*/
int
Array::dimension_stride(Dim_iter i, bool /*constrained*/)
{
return (!_shape.empty()) ? (*i).stride : 0;
}
/** This function returns the name of the dimension indicated with
<i>p</i>. Since this method is public, it is possible to call it
before the Array object has been properly initialized. This will
cause an exception. So don't do that.
@brief Returns the name of the specified dimension.
@param i The dimension.
@return A pointer to a string containing the dimension name.
*/
string
Array::dimension_name(Dim_iter i)
{
// Jose Garcia
// Since this method is public, it is possible for a user
// to call it before the Array object has been properly set
// this will cause an exception which is the user's fault.
// (User in this context is the developer of the surrogate library.)
if (_shape.empty())
throw InternalErr(__FILE__, __LINE__,
"*This* array has no dimensions.");
return (*i).name;
}
D4Dimension *
Array::dimension_D4dim(Dim_iter i)
{
return (!_shape.empty()) ? (*i).dim : 0;
}
D4Maps *
Array::maps()
{
if (!d_maps) d_maps = new D4Maps(this); // init with this as parent
return d_maps;
}
#if 0
/**
* @brief Returns the width of the data, in bytes.
* @param constrained if true, return the size of the array in bytes taking into
* account the current constraints on various dimensions. False by default.
* @return The number of bytes needed to store the array values.
*/
unsigned int Array::width(bool constrained) const
{
if (constrained) {
// This preserves the original method's semantics when we ask for the
// size of the constrained array but no constraint has been applied.
// In this case, length will be -1. Wrong, I know...
return length() * var()->width(constrained);
}
else {
int length = 1;
for (Dim_iter i = _shape.begin(); i != _shape.end(); i++) {
length *= dimension_size(i, false);
}
return length * var()->width(false);
}
}
#endif
class PrintD4ArrayDimXMLWriter: public unary_function<Array::dimension&, void> {
XMLWriter &xml;
// Was this variable constrained using local/direct slicing? i.e., is d_local_constraint set?
// If so, don't use shared dimensions; instead emit Dim elements that are anonymous.
bool d_constrained;
public:
PrintD4ArrayDimXMLWriter(XMLWriter &xml, bool c) : xml(xml), d_constrained(c) { }
void operator()(Array::dimension &d)
{
// This duplicates code in D4Dimensions (where D4Dimension::print_dap4() is defined
// because of the need to print the constrained size of a dimension. I think that
// the constraint information has to be kept here and not in the dimension (since they
// are shared dims). Could hack print_dap4() to take the constrained size, however.
if (xmlTextWriterStartElement(xml.get_writer(), (const xmlChar*) "Dim") < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write Dim element");
string name = (d.dim) ? d.dim->fully_qualified_name() : d.name;
// If there is a name, there must be a Dimension (named dimension) in scope
// so write its name but not its size.
if (!d_constrained && !name.empty()) {
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "name", (const xmlChar*) name.c_str())
< 0) throw InternalErr(__FILE__, __LINE__, "Could not write attribute for name");
}
else if (d.use_sdim_for_slice) {
assert(!name.empty());
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "name", (const xmlChar*) name.c_str())
< 0) throw InternalErr(__FILE__, __LINE__, "Could not write attribute for name");
}
else {
ostringstream size;
size << (d_constrained ? d.c_size : d.size);
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "size",
(const xmlChar*) size.str().c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write attribute for name");
}
if (xmlTextWriterEndElement(xml.get_writer()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not end Dim element");
}
};
class PrintD4ConstructorVarXMLWriter: public unary_function<BaseType*, void> {
XMLWriter &xml;
bool d_constrained;
public:
PrintD4ConstructorVarXMLWriter(XMLWriter &xml, bool c) : xml(xml), d_constrained(c) { }
void operator()(BaseType *btp)
{
btp->print_dap4(xml, d_constrained);
}
};
class PrintD4MapXMLWriter: public unary_function<D4Map*, void> {
XMLWriter &xml;
public:
PrintD4MapXMLWriter(XMLWriter &xml) : xml(xml) { }
void operator()(D4Map *m)
{
m->print_dap4(xml);
}
};
/**
* @brief Print the DAP4 representation of an array.
* @param xml
* @param constrained
*/
void
Array::print_dap4(XMLWriter &xml, bool constrained /* default: false*/)
{
if (constrained && !send_p()) return;
if (xmlTextWriterStartElement(xml.get_writer(), (const xmlChar*) var()->type_name().c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write " + type_name() + " element");
if (!name().empty())
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "name", (const xmlChar*)name().c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write attribute for name");
// Hack job... Copied from D4Enum::print_xml_writer. jhrg 11/12/13
if (var()->type() == dods_enum_c) {
D4Enum *e = static_cast<D4Enum*>(var());
string path = e->enumeration()->name();
if (e->enumeration()->parent()) {
// print the FQN for the enum def; D4Group::FQN() includes the trailing '/'
path = static_cast<D4Group*>(e->enumeration()->parent()->parent())->FQN() + path;
}
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "enum", (const xmlChar*)path.c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write attribute for enum");
}
if (prototype()->is_constructor_type()) {
Constructor &c = static_cast<Constructor&>(*prototype());
for_each(c.var_begin(), c.var_end(), PrintD4ConstructorVarXMLWriter(xml, constrained));
// bind2nd(mem_fun_ref(&BaseType::print_dap4), xml));
}
// Drop the local_constraint which is per-array and use a per-dimension on instead
for_each(dim_begin(), dim_end(), PrintD4ArrayDimXMLWriter(xml, constrained));
attributes()->print_dap4(xml);
for_each(maps()->map_begin(), maps()->map_end(), PrintD4MapXMLWriter(xml));
if (xmlTextWriterEndElement(xml.get_writer()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not end " + type_name() + " element");
}
/** Prints a declaration for the Array. This is what appears in a
DDS. If the Array is constrained, the declaration will reflect
the size of the Array once the constraint is applied.
@brief Prints a DDS entry for the Array.
@param out Write the output to this FILE *.
@param space A string containing spaces to precede the
declaration.
@param print_semi A boolean indicating whether to print a
semi-colon after the declaration. (TRUE means ``print a
semi-colon.'')
@param constraint_info A boolean value. See
<tt>BaseType::print_decl()</tt>.
@param constrained This argument should be TRUE if the Array is
constrained, and FALSE otherwise.
*/
void
Array::print_decl(FILE *out, string space, bool print_semi,
bool constraint_info, bool constrained)
{
ostringstream oss;
print_decl(oss, space, print_semi, constraint_info, constrained);
fwrite(oss.str().data(), sizeof(char), oss.str().length(), out);
}
/** Prints a declaration for the Array. This is what appears in a
DDS. If the Array is constrained, the declaration will reflect
the size of the Array once the constraint is applied.
@brief Prints a DDS entry for the Array.
@param out Write the output to this ostream.
@param space A string containing spaces to precede the
declaration.
@param print_semi A boolean indicating whether to print a
semi-colon after the declaration. (TRUE means ``print a
semi-colon.'')
@param constraint_info A boolean value. See
<tt>BaseType::print_decl()</tt>.
@param constrained This argument should be TRUE if the Array is
constrained, and FALSE otherwise.
*/
void Array::print_decl(ostream &out, string space, bool print_semi, bool constraint_info, bool constrained)
{
if (constrained && !send_p()) return;
// print it, but w/o semicolon
var()->print_decl(out, space, false, constraint_info, constrained);
for (Dim_citer i = _shape.begin(); i != _shape.end(); i++) {
out << "[";
if ((*i).name != "") {
out << id2www((*i).name) << " = ";
}
if (constrained) {
out << (*i).c_size << "]";
}
else {
out << (*i).size << "]";
}
}
if (print_semi) {
out << ";\n";
}
}
/**
* @deprecated
*/
void
Array::print_xml(FILE *out, string space, bool constrained)
{
XMLWriter xml(space);
print_xml_writer_core(xml, constrained, "Array");
fwrite(xml.get_doc(), sizeof(char), xml.get_doc_size(), out);
}
/**
* @deprecated
*/
void
Array::print_xml(ostream &out, string space, bool constrained)
{
XMLWriter xml(space);
print_xml_writer_core(xml, constrained, "Array");
out << xml.get_doc();
}
/**
* @deprecated
*/
void
Array::print_as_map_xml(FILE *out, string space, bool constrained)
{
XMLWriter xml(space);
print_xml_writer_core(xml, constrained, "Map");
fwrite(xml.get_doc(), sizeof(char), xml.get_doc_size(), out);
}
/**
* @deprecated
*/
void
Array::print_as_map_xml(ostream &out, string space, bool constrained)
{
XMLWriter xml(space);
print_xml_writer_core(xml, constrained, "Map");
out << xml.get_doc();
}
/**
* @deprecated
*/
void
Array::print_xml_core(FILE *out, string space, bool constrained, string tag)
{
XMLWriter xml(space);
print_xml_writer_core(xml, constrained, tag);
fwrite(xml.get_doc(), sizeof(char), xml.get_doc_size(), out);
}
/**
* @deprecated
*/
void
Array::print_xml_core(ostream &out, string space, bool constrained, string tag)
{
XMLWriter xml(space);
print_xml_writer_core(xml, constrained, tag);
out << xml.get_doc();
}
void
Array::print_xml_writer(XMLWriter &xml, bool constrained)
{
print_xml_writer_core(xml, constrained, "Array");
}
void
Array::print_as_map_xml_writer(XMLWriter &xml, bool constrained)
{
print_xml_writer_core(xml, constrained, "Map");
}
class PrintArrayDimXMLWriter : public unary_function<Array::dimension&, void>
{
XMLWriter &xml;
bool d_constrained;
public:
PrintArrayDimXMLWriter(XMLWriter &xml, bool c) : xml(xml), d_constrained(c) {}
void operator()(Array::dimension &d)
{
if (xmlTextWriterStartElement(xml.get_writer(), (const xmlChar*)"dimension") < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write dimension element");
if (!d.name.empty())
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "name", (const xmlChar*)d.name.c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write attribute for name");
ostringstream size;
size << (d_constrained ? d.c_size : d.size);
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "size", (const xmlChar*)size.str().c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write attribute for name");
if (xmlTextWriterEndElement(xml.get_writer()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not end dimension element");
}
};
void
Array::print_xml_writer_core(XMLWriter &xml, bool constrained, string tag)
{
if (constrained && !send_p())
return;
if (xmlTextWriterStartElement(xml.get_writer(), (const xmlChar*)tag.c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write " + tag + " element");
if (!name().empty())
if (xmlTextWriterWriteAttribute(xml.get_writer(), (const xmlChar*) "name", (const xmlChar*)name().c_str()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not write attribute for name");
get_attr_table().print_xml_writer(xml);
BaseType *btp = var();
string tmp_name = btp->name();
btp->set_name("");
btp->print_xml_writer(xml, constrained);
btp->set_name(tmp_name);
for_each(dim_begin(), dim_end(), PrintArrayDimXMLWriter(xml, constrained));
if (xmlTextWriterEndElement(xml.get_writer()) < 0)
throw InternalErr(__FILE__, __LINE__, "Could not end " + tag + " element");
}
/** Prints the values in ASCII of the entire (constrained) array. This method
Attempts to make an aesthetically pleasing display. However, it is
primarily intended for debugging purposes.
@param out Write the output to this FILE *.
@param index
@param dims
@param shape
@brief Print the value given the current constraint.
*/
unsigned int
Array::print_array(FILE *out, unsigned int index, unsigned int dims,
unsigned int shape[])
{
ostringstream oss;
unsigned int i = print_array(oss, index, dims, shape);
fwrite(oss.str().data(), sizeof(char), oss.str().length(), out);
return i;
}
/** Prints the values in ASCII of the entire (constrained) array. This method
Attempts to make an anesthetically pleasing display. However, it is
primarily intended for debugging purposes.
@param out Write the output to this ostream
@param index
@param dims
@param shape
@brief Print the value given the current constraint.
*/
unsigned int Array::print_array(ostream &out, unsigned int index, unsigned int dims, unsigned int shape[])
{
if (dims == 1) {
out << "{";
// Added test in case this method is passed an array with no elements. jhrg 1/27/16
if (shape[0] >= 1) {
for (unsigned i = 0; i < shape[0] - 1; ++i) {
var(index++)->print_val(out, "", false);
out << ", ";
}
var(index++)->print_val(out, "", false);
}
out << "}";
return index;
}
else {
out << "{";
// Fixed an off-by-one error in the following loop. Since the array
// length is shape[dims-1]-1 *and* since we want one less dimension
// than that, the correct limit on this loop is shape[dims-2]-1. From
// Todd Karakasian.
//
// The saga continues; the loop test should be `i < shape[0]-1'. jhrg
// 9/12/96.
//
// For arrays that hold zero values but have rank > 1, the print out
// may look a little odd (e.g., x[4][0] will print as { {}, {}, {}, {} })
// but it's not wrong and this is really for debugging mostly. jhrg 1/28/16
if (shape[0] > 0) {
for (unsigned i = 0; i < shape[0] - 1; ++i) {
index = print_array(out, index, dims - 1, shape + 1);
out << ",";
}
index = print_array(out, index, dims - 1, shape + 1);
}
out << "}";
return index;
}
}
void
Array::print_val(FILE *out, string space, bool print_decl_p)
{
ostringstream oss;
print_val(oss, space, print_decl_p);
fwrite(oss.str().data(), sizeof(char), oss.str().length(), out);
}
void
Array::print_val(ostream &out, string space, bool print_decl_p)
{
// print the declaration if print decl is true.
// for each dimension,
// for each element,
// print the array given its shape, number of dimensions.
// Add the `;'
if (print_decl_p) {
print_decl(out, space, false, false, false);
out << " = " ;
}
unsigned int *shape = new unsigned int[dimensions(true)];
unsigned int index = 0;
for (Dim_iter i = _shape.begin(); i != _shape.end() && index < dimensions(true); ++i)
shape[index++] = dimension_size(i, true);
print_array(out, 0, dimensions(true), shape);
delete [] shape; shape = 0;
if (print_decl_p) {
out << ";\n" ;
}
}
/** This function checks semantic features of the Array. Currently,
the only check specific to the Array is that there must be
dimensions. The rest is inherited from
<tt>BaseType::check_semantics()</tt>.
@brief Check semantic features of the Array.
@return A boolean value. FALSE means there was a problem.
*/
bool
Array::check_semantics(string &msg, bool)
{
bool sem = BaseType::check_semantics(msg) && !_shape.empty();
if (!sem)
msg = "An array variable must have dimensions";
return sem;
}
/** @brief dumps information about this object
*
* Displays the pointer value of this instance and information about this
* instance.
*
* @param strm C++ i/o stream to dump the information to
* @return void
*/
void
Array::dump(ostream &strm) const
{
strm << DapIndent::LMarg << "Array::dump - ("
<< (void *)this << ")" << endl ;
DapIndent::Indent() ;
Vector::dump(strm) ;
strm << DapIndent::LMarg << "shape:" << endl ;
DapIndent::Indent() ;
Dim_citer i = _shape.begin() ;
Dim_citer ie = _shape.end() ;
unsigned int dim_num = 0 ;
for (; i != ie; i++) {
strm << DapIndent::LMarg << "dimension " << dim_num++ << ":"
<< endl ;
DapIndent::Indent() ;
strm << DapIndent::LMarg << "name: " << (*i).name << endl ;
strm << DapIndent::LMarg << "size: " << (*i).size << endl ;
strm << DapIndent::LMarg << "start: " << (*i).start << endl ;
strm << DapIndent::LMarg << "stop: " << (*i).stop << endl ;
strm << DapIndent::LMarg << "stride: " << (*i).stride << endl ;
strm << DapIndent::LMarg << "constrained size: " << (*i).c_size
<< endl ;
DapIndent::UnIndent() ;
}
DapIndent::UnIndent() ;
DapIndent::UnIndent() ;
}
} // namespace libdap