/* rstat/rquantile.c * * Copyright (C) 2015 Patrick Alken * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 3 of the License, or (at * your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. */ #include #include #include #include #include #include #include /* * Running quantile calculation based on the paper * * [1] R. Jain and I. Chlamtac, "The P^2 algorithm for dynamic * calculation of quantiles and histograms without storing * observations", Communications of the ACM, October 1985 */ static double calc_psq(const double qp1, const double q, const double qm1, const double d, const double np1, const double n, const double nm1); gsl_rstat_quantile_workspace * gsl_rstat_quantile_alloc(const double p) { gsl_rstat_quantile_workspace *w; w = calloc(1, sizeof(gsl_rstat_quantile_workspace)); if (w == 0) { GSL_ERROR_NULL ("failed to allocate space for workspace", GSL_ENOMEM); } w->p = p; gsl_rstat_quantile_reset(w); return w; } /* gsl_rstat_quantile_alloc() */ void gsl_rstat_quantile_free(gsl_rstat_quantile_workspace *w) { free(w); } /* gsl_rstat_quantile_free() */ int gsl_rstat_quantile_reset(gsl_rstat_quantile_workspace *w) { const double p = w->p; size_t i; /* initialize positions n */ for (i = 0; i < 5; ++i) w->npos[i] = i + 1; /* initialize n' */ w->np[0] = 1.0; w->np[1] = 1.0 + 2.0 * p; w->np[2] = 1.0 + 4.0 * p; w->np[3] = 3.0 + 2.0 * p; w->np[4] = 5.0; /* initialize dn' */ w->dnp[0] = 0.0; w->dnp[1] = 0.5 * p; w->dnp[2] = p; w->dnp[3] = 0.5 * (1.0 + p); w->dnp[4] = 1.0; w->n = 0; return GSL_SUCCESS; } int gsl_rstat_quantile_add(const double x, gsl_rstat_quantile_workspace *w) { if (w->n < 5) { w->q[w->n] = x; } else { int i; int k = -1; if (w->n == 5) { /* initialization: sort the first five heights */ gsl_sort(w->q, 1, w->n); } /* step B1: find k such that q_k <= x < q_{k+1} */ if (x < w->q[0]) { w->q[0] = x; k = 0; } else if (x >= w->q[4]) { w->q[4] = x; k = 3; } else { for (i = 0; i <= 3; ++i) { if (w->q[i] <= x && x < w->q[i + 1]) { k = i; break; } } } if (k < 0) { /* we could get here if x is nan */ GSL_ERROR ("invalid input argument x", GSL_EINVAL); } /* step B2(a): update n_i */ for (i = k + 1; i <= 4; ++i) ++(w->npos[i]); /* step B2(b): update n_i' */ for (i = 0; i < 5; ++i) w->np[i] += w->dnp[i]; /* step B3: update heights */ for (i = 1; i <= 3; ++i) { double ni = (double) w->npos[i]; double d = w->np[i] - ni; if ((d >= 1.0 && (w->npos[i + 1] - w->npos[i] > 1)) || (d <= -1.0 && (w->npos[i - 1] - w->npos[i] < -1))) { int dsign = (d > 0.0) ? 1 : -1; double qp1 = w->q[i + 1]; double qi = w->q[i]; double qm1 = w->q[i - 1]; double np1 = (double) w->npos[i + 1]; double nm1 = (double) w->npos[i - 1]; double qp = calc_psq(qp1, qi, qm1, (double) dsign, np1, ni, nm1); if (qm1 < qp && qp < qp1) w->q[i] = qp; else { /* use linear formula */ w->q[i] += dsign * (w->q[i + dsign] - qi) / ((double) w->npos[i + dsign] - ni); } w->npos[i] += dsign; } } } ++(w->n); return GSL_SUCCESS; } /* gsl_rstat_quantile_add() */ double gsl_rstat_quantile_get(gsl_rstat_quantile_workspace *w) { if (w->n >= 5) { return w->q[2]; } else { /* not yet initialized */ gsl_sort(w->q, 1, w->n); return gsl_stats_quantile_from_sorted_data(w->q, 1, w->n, w->p); } } /* gsl_rstat_quantile_get() */ static double calc_psq(const double qp1, const double q, const double qm1, const double d, const double np1, const double n, const double nm1) { double outer = d / (np1 - nm1); double inner_left = (n - nm1 + d) * (qp1 - q) / (np1 - n); double inner_right = (np1 - n - d) * (q - qm1) / (n - nm1); return q + outer * (inner_left + inner_right); } /* calc_psq() */