/* linalg/test_cod.c * * Copyright (C) 2017 Patrick Alken * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 3 of the License, or (at * your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. */ #include #include #include #include #include #include #include #include #include #include static int test_COD_decomp_eps(const gsl_matrix * m, const double eps, const char *desc); static int test_COD_decomp(gsl_rng *r); static int test_COD_lssolve_eps(const gsl_matrix * m, const double * actual, const double eps, const char *desc); static int test_COD_lssolve(void); static int test_COD_lssolve2_eps(const double lambda, const gsl_matrix * A, const gsl_vector * b, const double eps, const char *desc); static int test_COD_lssolve2(gsl_rng * r); /* create a matrix of a given rank */ static int create_rank_matrix(const size_t rank, gsl_matrix * m, gsl_rng * r) { const size_t M = m->size1; const size_t N = m->size2; size_t i; gsl_vector *u = gsl_vector_alloc(M); gsl_vector *v = gsl_vector_alloc(N); gsl_matrix_set_zero(m); /* add several rank-1 matrices together */ for (i = 0; i < rank; ++i) { create_random_vector(u, r); create_random_vector(v, r); gsl_blas_dger(1.0, u, v, m); } gsl_vector_free(u); gsl_vector_free(v); return GSL_SUCCESS; } static int test_COD_decomp_eps(const gsl_matrix * m, const double eps, const char *desc) { int s = 0; size_t i, j, M = m->size1, N = m->size2; size_t rank; gsl_matrix * QRZT = gsl_matrix_alloc(M, N); gsl_matrix * Q = gsl_matrix_alloc(M, M); gsl_matrix * R = gsl_matrix_alloc(M, N); gsl_matrix * QR = gsl_matrix_alloc(M, N); gsl_matrix * Z = gsl_matrix_alloc(N, N); gsl_vector * tau_Q = gsl_vector_alloc(GSL_MIN(M, N)); gsl_vector * tau_Z = gsl_vector_alloc(GSL_MIN(M, N)); gsl_vector * work = gsl_vector_alloc(N); gsl_matrix * lhs = gsl_matrix_alloc(M, N); gsl_matrix * rhs = gsl_matrix_alloc(M, N); gsl_permutation * perm = gsl_permutation_alloc(N); gsl_matrix_memcpy(QRZT, m); s += gsl_linalg_COD_decomp(QRZT, tau_Q, tau_Z, perm, &rank, work); s += gsl_linalg_COD_unpack(QRZT, tau_Q, tau_Z, rank, Q, R, Z); /* compute lhs = m P */ gsl_matrix_memcpy(lhs, m); gsl_permute_matrix(perm, lhs); /* compute rhs = Q R Z^T */ gsl_blas_dgemm (CblasNoTrans, CblasNoTrans, 1.0, Q, R, 0.0, QR); gsl_blas_dgemm (CblasNoTrans, CblasTrans, 1.0, QR, Z, 0.0, rhs); for (i = 0; i < M; i++) { for (j = 0; j < N; j++) { double aij = gsl_matrix_get(rhs, i, j); double bij = gsl_matrix_get(lhs, i, j); gsl_test_rel(aij, bij, eps, "%s (%3lu,%3lu)[%lu,%lu]: %22.18g %22.18g\n", desc, M, N, i, j, aij, bij); } } gsl_permutation_free (perm); gsl_vector_free(work); gsl_vector_free(tau_Q); gsl_vector_free(tau_Z); gsl_matrix_free(QRZT); gsl_matrix_free(lhs); gsl_matrix_free(rhs); gsl_matrix_free(QR); gsl_matrix_free(Q); gsl_matrix_free(R); gsl_matrix_free(Z); return s; } static int test_COD_decomp(gsl_rng *r) { int s = 0; size_t N; gsl_matrix *m; /* test COD decomposition on Hilbert matrices */ for (N = 1; N <= 12; ++N) { m = gsl_matrix_alloc(N, N); create_hilbert_matrix2(m); test_COD_decomp_eps(m, 256.0 * N * GSL_DBL_EPSILON, "COD_decomp hilbert"); gsl_matrix_free(m); } /* build some matrices of a given rank and test */ m = gsl_matrix_alloc(100, 50); create_rank_matrix(26, m, r); test_COD_decomp_eps(m, 1.0e2 * GSL_DBL_EPSILON, "COD_decomp rank 26"); gsl_matrix_free(m); m = gsl_matrix_alloc(550, 200); create_rank_matrix(176, m, r); test_COD_decomp_eps(m, 1.0e3 * GSL_DBL_EPSILON, "COD_decomp rank 176"); gsl_matrix_free(m); test_COD_decomp_eps(m35, 1.0e1 * GSL_DBL_EPSILON, "COD_decomp m(3,5)"); test_COD_decomp_eps(m53, 1.0e1 * GSL_DBL_EPSILON, "COD_decomp m(5,3)"); test_COD_decomp_eps(s35, 1.0e1 * GSL_DBL_EPSILON, "COD_decomp s(3,5)"); test_COD_decomp_eps(s53, 1.0e1 * GSL_DBL_EPSILON, "COD_decomp s(5,3)"); test_COD_decomp_eps(vander2, 1.0e1 * GSL_DBL_EPSILON, "COD_decomp vander(2)"); test_COD_decomp_eps(vander3, 1.0e1 * GSL_DBL_EPSILON, "COD_decomp vander(3)"); test_COD_decomp_eps(vander4, 1.0e1 * GSL_DBL_EPSILON, "COD_decomp vander(4)"); test_COD_decomp_eps(vander12, 1e-3, "COD_decomp vander(12)"); /* FIXME: large tolerance needed */ return s; } static int test_COD_lssolve_eps(const gsl_matrix * m, const double * actual, const double eps, const char *desc) { int s = 0; size_t i, M = m->size1, N = m->size2; gsl_vector * lhs = gsl_vector_alloc(M); gsl_vector * rhs = gsl_vector_alloc(M); gsl_matrix * QRZT = gsl_matrix_alloc(M, N); gsl_vector * tau_Q = gsl_vector_alloc(GSL_MIN(M, N)); gsl_vector * tau_Z = gsl_vector_alloc(GSL_MIN(M, N)); gsl_vector * work = gsl_vector_alloc(N); gsl_vector * x = gsl_vector_alloc(N); gsl_vector * r = gsl_vector_alloc(M); gsl_vector * res = gsl_vector_alloc(M); gsl_permutation * perm = gsl_permutation_alloc(N); size_t rank; gsl_matrix_memcpy(QRZT, m); for (i = 0; i < M; i++) gsl_vector_set(rhs, i, i + 1.0); s += gsl_linalg_COD_decomp(QRZT, tau_Q, tau_Z, perm, &rank, work); s += gsl_linalg_COD_lssolve(QRZT, tau_Q, tau_Z, perm, rank, rhs, x, res); for (i = 0; i < N; i++) { double xi = gsl_vector_get(x, i); gsl_test_rel(xi, actual[i], eps, "%s (%3lu,%3lu)[%lu]: %22.18g %22.18g\n", desc, M, N, i, xi, actual[i]); } /* compute residual r = b - m x */ if (M == N) { gsl_vector_set_zero(r); } else { gsl_vector_memcpy(r, rhs); gsl_blas_dgemv(CblasNoTrans, -1.0, m, x, 1.0, r); } for (i = 0; i < N; i++) { double r1 = gsl_vector_get(res, i); double r2 = gsl_vector_get(r, i); if (fabs(r2) < 1.0e3 * GSL_DBL_EPSILON) { gsl_test_abs(r1, r2, 10.0 * eps, "%s res (%3lu,%3lu)[%lu]: %22.18g %22.18g\n", desc, M, N, i, r1, r2); } else { gsl_test_rel(r1, r2, eps, "%s res (%3lu,%3lu)[%lu]: %22.18g %22.18g\n", desc, M, N, i, r1, r2); } } gsl_vector_free(r); gsl_vector_free(res); gsl_vector_free(x); gsl_vector_free(tau_Q); gsl_vector_free(tau_Z); gsl_matrix_free(QRZT); gsl_vector_free(rhs); gsl_vector_free(lhs); gsl_vector_free(work); gsl_permutation_free(perm); return s; } static int test_COD_lssolve(void) { int s = 0; test_COD_lssolve_eps(m53, m53_lssolution, 1.0e4 * GSL_DBL_EPSILON, "COD_lssolve m(5,3)"); test_COD_lssolve_eps(hilb2, hilb2_solution, 1.0e2 * GSL_DBL_EPSILON, "COD_lssolve hilbert(2)"); test_COD_lssolve_eps(hilb3, hilb3_solution, 1.0e2 * GSL_DBL_EPSILON, "COD_lssolve hilbert(3)"); test_COD_lssolve_eps(hilb4, hilb4_solution, 1.0e4 * GSL_DBL_EPSILON, "COD_lssolve hilbert(4)"); test_COD_lssolve_eps(vander2, vander2_solution, 1.0e1 * GSL_DBL_EPSILON, "COD_lssolve vander(2)"); test_COD_lssolve_eps(vander3, vander3_solution, 1.0e1 * GSL_DBL_EPSILON, "COD_lssolve vander(3)"); test_COD_lssolve_eps(vander4, vander4_solution, 1.0e2 * GSL_DBL_EPSILON, "COD_lssolve vander(4)"); /* rank-1 least squares problem from the 'lin2' test dataset for multifit_nlinear */ { const size_t M = 20; const size_t N = 5; /* unique minimum norm solution from "Factorize" matlab package */ const double x_ls[] = { 1.818181818181817e-02, 3.636363636363636e-02, 5.454545454545454e-02, 7.272727272727272e-02, 9.090909090909088e-02 }; gsl_matrix *m = gsl_matrix_alloc(M, N); size_t i, j; for (i = 0; i < M; ++i) { for (j = 0; j < N; ++j) { gsl_matrix_set(m, i, j, (i + 1.0) * (j + 1.0)); } } test_COD_lssolve_eps(m, x_ls, 1.0e2 * GSL_DBL_EPSILON, "COD_lssolve lin2"); gsl_matrix_free(m); } return s; } /* solve: min ||b - A x||^2 + lambda^2 ||x||^2 */ static int test_COD_lssolve2_eps(const double lambda, const gsl_matrix * A, const gsl_vector * b, const double eps, const char *desc) { int s = 0; size_t i, M = A->size1, N = A->size2; gsl_vector * lhs = gsl_vector_alloc(M); gsl_matrix * QRZT = gsl_matrix_alloc(M, N); gsl_vector * tau_Q = gsl_vector_alloc(GSL_MIN(M, N)); gsl_vector * tau_Z = gsl_vector_alloc(GSL_MIN(M, N)); gsl_vector * work = gsl_vector_alloc(N); gsl_vector * x = gsl_vector_alloc(N); gsl_vector * x_aug = gsl_vector_alloc(N); gsl_vector * r = gsl_vector_alloc(M); gsl_vector * res = gsl_vector_alloc(M); gsl_permutation * perm = gsl_permutation_alloc(N); size_t rank; /* form full rank augmented system B = [ A ; lambda*I_N ], f = [ rhs ; 0 ] and solve with QRPT */ { gsl_vector_view v; gsl_matrix_view m; gsl_permutation *p = gsl_permutation_alloc(N); gsl_matrix * B = gsl_matrix_calloc(M + N, N); gsl_vector * f = gsl_vector_calloc(M + N); gsl_vector * tau = gsl_vector_alloc(N); gsl_vector * residual = gsl_vector_alloc(M + N); int signum; m = gsl_matrix_submatrix(B, 0, 0, M, N); gsl_matrix_memcpy(&m.matrix, A); m = gsl_matrix_submatrix(B, M, 0, N, N); v = gsl_matrix_diagonal(&m.matrix); gsl_vector_set_all(&v.vector, lambda); v = gsl_vector_subvector(f, 0, M); gsl_vector_memcpy(&v.vector, b); /* solve: [ A ; lambda*I ] x_aug = [ b ; 0 ] */ gsl_linalg_QRPT_decomp(B, tau, p, &signum, work); gsl_linalg_QRPT_lssolve(B, tau, p, f, x_aug, residual); gsl_permutation_free(p); gsl_matrix_free(B); gsl_vector_free(f); gsl_vector_free(tau); gsl_vector_free(residual); } gsl_matrix_memcpy(QRZT, A); s += gsl_linalg_COD_decomp(QRZT, tau_Q, tau_Z, perm, &rank, work); { gsl_matrix *S = gsl_matrix_alloc(rank, rank); gsl_vector *workr = gsl_vector_alloc(rank); s += gsl_linalg_COD_lssolve2(lambda, QRZT, tau_Q, tau_Z, perm, rank, b, x, res, S, workr); gsl_matrix_free(S); gsl_vector_free(workr); } for (i = 0; i < N; i++) { double xi = gsl_vector_get(x, i); double yi = gsl_vector_get(x_aug, i); gsl_test_rel(xi, yi, eps, "%s (%3lu,%3lu)[%lu]: %22.18g %22.18g\n", desc, M, N, i, xi, yi); } /* compute residual r = b - A x */ if (M == N) { gsl_vector_set_zero(r); } else { gsl_vector_memcpy(r, b); gsl_blas_dgemv(CblasNoTrans, -1.0, A, x, 1.0, r); } for (i = 0; i < N; i++) { double xi = gsl_vector_get(res, i); double yi = gsl_vector_get(r, i); gsl_test_rel(xi, yi, sqrt(eps), "%s res (%3lu,%3lu)[%lu]: %22.18g %22.18g\n", desc, M, N, i, xi, yi); } gsl_vector_free(r); gsl_vector_free(res); gsl_vector_free(x); gsl_vector_free(x_aug); gsl_vector_free(tau_Q); gsl_vector_free(tau_Z); gsl_matrix_free(QRZT); gsl_vector_free(lhs); gsl_vector_free(work); gsl_permutation_free(perm); return s; } static int test_COD_lssolve2(gsl_rng * r) { int s = 0; gsl_matrix *m; gsl_vector *b; size_t M, N; const double lambda = 2.3; M = 100; N = 50; m = gsl_matrix_alloc(M, N); b = gsl_vector_alloc(M); create_rank_matrix(26, m, r); create_random_vector(b, r); test_COD_lssolve2_eps(lambda, m, b, 1.0e2 * M * GSL_DBL_EPSILON, "COD_lssolve2 rank 26"); gsl_matrix_free(m); gsl_vector_free(b); M = 500; N = 450; m = gsl_matrix_alloc(M, N); b = gsl_vector_alloc(M); create_rank_matrix(278, m, r); create_random_vector(b, r); test_COD_lssolve2_eps(lambda, m, b, 1.0e4 * M * GSL_DBL_EPSILON, "COD_lssolve2 rank 278"); gsl_matrix_free(m); gsl_vector_free(b); return s; }