Blame movstat/snacc.c

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/* movstat/snacc.c
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 *
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 * Moving window S_n accumulator
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 * 
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 * Copyright (C) 2018 Patrick Alken
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 * 
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 * This program is free software; you can redistribute it and/or modify
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 * it under the terms of the GNU General Public License as published by
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 * the Free Software Foundation; either version 3 of the License, or (at
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 * your option) any later version.
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 * 
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 * This program is distributed in the hope that it will be useful, but
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 * WITHOUT ANY WARRANTY; without even the implied warranty of
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 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
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 * General Public License for more details.
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 * 
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 * You should have received a copy of the GNU General Public License
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 * along with this program; if not, write to the Free Software
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 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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 */
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#include <config.h>
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#include <gsl/gsl_math.h>
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#include <gsl/gsl_vector.h>
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#include <gsl/gsl_errno.h>
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#include <gsl/gsl_movstat.h>
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#include <gsl/gsl_sort.h>
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#include <gsl/gsl_statistics.h>
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typedef double snacc_type_t;
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typedef snacc_type_t ringbuf_type_t;
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#include "ringbuf.c"
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typedef struct
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{
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  snacc_type_t *window; /* linear array for current window */
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  snacc_type_t *work;   /* workspace */
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  ringbuf *rbuf;        /* ring buffer storing current window */
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} snacc_state_t;
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static size_t
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snacc_size(const size_t n)
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{
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  size_t size = 0;
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  size += sizeof(snacc_state_t);
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  size += 2 * n * sizeof(snacc_type_t);
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  size += ringbuf_size(n);
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  return size;
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}
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static int
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snacc_init(const size_t n, void * vstate)
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{
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  snacc_state_t * state = (snacc_state_t *) vstate;
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  state->window = (snacc_type_t *) ((unsigned char *) vstate + sizeof(snacc_state_t));
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  state->work = (snacc_type_t *) ((unsigned char *) state->window + n * sizeof(snacc_type_t));
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  state->rbuf = (ringbuf *) ((unsigned char *) state->work + n * sizeof(snacc_type_t));
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  ringbuf_init(n, state->rbuf);
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  return GSL_SUCCESS;
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}
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static int
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snacc_insert(const snacc_type_t x, void * vstate)
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{
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  snacc_state_t * state = (snacc_state_t *) vstate;
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  /* add new element to ring buffer */
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  ringbuf_insert(x, state->rbuf);
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  return GSL_SUCCESS;
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}
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static int
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snacc_delete(void * vstate)
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{
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  snacc_state_t * state = (snacc_state_t *) vstate;
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  if (!ringbuf_is_empty(state->rbuf))
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    ringbuf_pop_back(state->rbuf);
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  return GSL_SUCCESS;
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}
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/* FIXME XXX: this is inefficient - could be improved by maintaining a sorted ring buffer */
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static int
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snacc_get(void * params, snacc_type_t * result, const void * vstate)
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{
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  const snacc_state_t * state = (const snacc_state_t *) vstate;
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  size_t n = ringbuf_copy(state->window, state->rbuf);
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  (void) params;
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  gsl_sort(state->window, 1, n);
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  *result = gsl_stats_Sn_from_sorted_data(state->window, 1, n, state->work);
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  return GSL_SUCCESS;
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}
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static const gsl_movstat_accum sn_accum_type =
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{
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  snacc_size,
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  snacc_init,
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  snacc_insert,
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  snacc_delete,
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  snacc_get
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};
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const gsl_movstat_accum *gsl_movstat_accum_Sn = &sn_accum_type;