Blame movstat/movmad.c

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/* movstat/movmad.c
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 * 
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 * Copyright (C) 2018 Patrick Alken
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 * 
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 * This program is free software; you can redistribute it and/or modify
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 * it under the terms of the GNU General Public License as published by
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 * the Free Software Foundation; either version 3 of the License, or (at
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 * your option) any later version.
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 * 
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 * This program is distributed in the hope that it will be useful, but
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 * WITHOUT ANY WARRANTY; without even the implied warranty of
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 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
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 * General Public License for more details.
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 * 
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 * You should have received a copy of the GNU General Public License
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 * along with this program; if not, write to the Free Software
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 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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 */
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#include <config.h>
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#include <stdlib.h>
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#include <math.h>
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#include <gsl/gsl_math.h>
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#include <gsl/gsl_errno.h>
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#include <gsl/gsl_vector.h>
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#include <gsl/gsl_movstat.h>
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#include <gsl/gsl_sort.h>
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#include <gsl/gsl_statistics.h>
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/*
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gsl_movstat_mad()
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  Apply a moving MAD to an input vector (with scale factor to make an
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unbiased estimate of sigma)
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Inputs: endtype - how to handle end points
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        x       - input vector, size n
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        xmedian - (output) vector of median values of x, size n
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                  xmedian_i = median of window centered on x_i
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        xmad    - (output) vector of estimated standard deviations of x, size n
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                  xmad_i = MAD of i-th window: 1.4826 * median(|x_i - xmedian_i|)
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        w       - workspace
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*/
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int
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gsl_movstat_mad(const gsl_movstat_end_t endtype, const gsl_vector * x, gsl_vector * xmedian, gsl_vector * xmad,
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                gsl_movstat_workspace * w)
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{
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  if (x->size != xmedian->size)
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    {
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      GSL_ERROR("x and xmedian vectors must have same length", GSL_EBADLEN);
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    }
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  else if (x->size != xmad->size)
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    {
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      GSL_ERROR("x and xmad vectors must have same length", GSL_EBADLEN);
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    }
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  else
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    {
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      double scale = 1.482602218505602;
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      int status = gsl_movstat_apply_accum(endtype, x, gsl_movstat_accum_mad, &scale, xmedian, xmad, w);
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      return status;
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    }
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}
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/*
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gsl_movstat_mad0()
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  Apply a moving MAD to an input vector (without scale factor to make an
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unbiased estimate of sigma)
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Inputs: endtype - how to handle end points
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        x       - input vector, size n
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        xmedian - (output) vector of median values of x, size n
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                  xmedian_i = median of window centered on x_i
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        xmad    - (output) vector of estimated standard deviations of x, size n
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                  xmad_i = MAD of i-th window: median(|x_i - xmedian_i|)
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        w       - workspace
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*/
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int
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gsl_movstat_mad0(const gsl_movstat_end_t endtype, const gsl_vector * x, gsl_vector * xmedian, gsl_vector * xmad,
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                 gsl_movstat_workspace * w)
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{
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  if (x->size != xmedian->size)
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    {
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      GSL_ERROR("x and xmedian vectors must have same length", GSL_EBADLEN);
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    }
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  else if (x->size != xmad->size)
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    {
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      GSL_ERROR("x and xmad vectors must have same length", GSL_EBADLEN);
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    }
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  else
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    {
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      double scale = 1.0;
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      int status = gsl_movstat_apply_accum(endtype, x, gsl_movstat_accum_mad, &scale, xmedian, xmad, w);
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      return status;
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    }
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}