Blame movstat/mmacc.c

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/* movstat/mmacc.c
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 *
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 * Copyright (C) 2018 Patrick Alken
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 * 
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 * This program is free software; you can redistribute it and/or modify
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 * it under the terms of the GNU General Public License as published by
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 * the Free Software Foundation; either version 3 of the License, or (at
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 * your option) any later version.
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 * 
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 * This program is distributed in the hope that it will be useful, but
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 * WITHOUT ANY WARRANTY; without even the implied warranty of
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 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
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 * General Public License for more details.
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 * 
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 * You should have received a copy of the GNU General Public License
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 * along with this program; if not, write to the Free Software
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 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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 */
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/*
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 * This module contains routines for tracking minimum/maximum values of a
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 * moving fixed-sized window. It is based on the algorithm of:
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 *
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 * [1] Daniel Lemire, Streaming Maximum-Minimum Filter Using No More than Three Comparisons per Element,
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 *     Nordic Journal of Computing, Volume 13, Number 4, pages 328-339, 2006
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 *
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 * Also available as a preprint here: https://arxiv.org/abs/cs/0610046
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 */
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#include <config.h>
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#include <stdlib.h>
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#include <math.h>
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#include <gsl/gsl_math.h>
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#include <gsl/gsl_vector.h>
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#include <gsl/gsl_movstat.h>
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typedef double mmacc_type_t;
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typedef mmacc_type_t ringbuf_type_t;
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#include "deque.c"
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#include "ringbuf.c"
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typedef struct
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{
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  size_t n;             /* window size */
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  size_t k;             /* number of samples in current window */
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  mmacc_type_t xprev;   /* previous sample added to window */
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  ringbuf *rbuf;        /* ring buffer storing current window, size n */
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  deque *minque;        /* double-ended queue of min values (L) */
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  deque *maxque;        /* double-ended queue of max values (U) */
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} mmacc_state_t;
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static size_t mmacc_size(const size_t n);
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static int mmacc_init(const size_t n, void * vstate);
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static int mmacc_insert(const mmacc_type_t x, void * vstate);
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static int mmacc_delete(void * vstate);
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static int mmacc_min(void * params, mmacc_type_t * result, const void * vstate);
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static int mmacc_max(void * params, mmacc_type_t * result, const void * vstate);
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static int mmacc_minmax(void * params, mmacc_type_t * result, const void * vstate);
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static size_t
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mmacc_size(const size_t n)
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{
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  size_t size = 0;
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  size += sizeof(mmacc_state_t);
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  size += ringbuf_size(n);          /* rbuf */
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  size += 2 * deque_size(n + 1);    /* minque/maxque */
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  return size;
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}
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static int
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mmacc_init(const size_t n, void * vstate)
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{
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  mmacc_state_t * state = (mmacc_state_t *) vstate;
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  state->n = n;
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  state->k = 0;
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  state->xprev = 0.0;
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  state->rbuf = (ringbuf *) ((unsigned char *) vstate + sizeof(mmacc_state_t));
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  state->minque = (deque *) ((unsigned char *) state->rbuf + ringbuf_size(n));
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  state->maxque = (deque *) ((unsigned char *) state->minque + deque_size(n + 1));
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  ringbuf_init(n, state->rbuf);
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  deque_init(n + 1, state->minque);
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  deque_init(n + 1, state->maxque);
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  return GSL_SUCCESS;
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}
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static int
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mmacc_insert(const mmacc_type_t x, void * vstate)
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{
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  mmacc_state_t * state = (mmacc_state_t *) vstate;
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  int head, tail;
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  if (state->k == 0)
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    {
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      /* first sample */
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      ringbuf_insert(x, state->rbuf);
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      head = state->rbuf->head;
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      deque_push_back(head, state->maxque);
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      deque_push_back(head, state->minque);
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    }
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  else
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    {
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      if (x > state->xprev)
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        {
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          deque_pop_back(state->maxque);
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          while (!deque_is_empty(state->maxque))
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            {
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              if (x <= state->rbuf->array[deque_peek_back(state->maxque)])
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                break;
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              deque_pop_back(state->maxque);
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            }
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        }
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      else
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        {
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          deque_pop_back(state->minque);
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          while (!deque_is_empty(state->minque))
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            {
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              if (x >= state->rbuf->array[deque_peek_back(state->minque)])
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                break;
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              deque_pop_back(state->minque);
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            }
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        }
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      /* store new sample into ring buffer */
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      tail = state->rbuf->tail;
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      ringbuf_insert(x, state->rbuf);
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      head = state->rbuf->head;
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      deque_push_back(head, state->maxque);
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      deque_push_back(head, state->minque);
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      if (state->k == state->n)
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        {
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          /*
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           * window is full - check if oldest window element is a global minimum/maximum
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           * of current window - if so pop it from U/L queues;
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           * the check head != tail ensures there is more than 1 element in the
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           * queue, do not pop if queue has only 1 element, since this element would
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           * be the newest sample
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           */
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          if (state->maxque->head != state->maxque->tail && tail == deque_peek_front(state->maxque))
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            deque_pop_front(state->maxque);
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          else if (state->minque->head != state->minque->tail && tail == deque_peek_front(state->minque))
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            deque_pop_front(state->minque);
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        }
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    }
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  if (state->k < state->n)
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    ++(state->k);
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  state->xprev = x;
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  return GSL_SUCCESS;
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}
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static int
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mmacc_delete(void * vstate)
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{
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  mmacc_state_t * state = (mmacc_state_t *) vstate;
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  if (state->k > 0)
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    {
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      /*
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       * check if oldest window element is a global minimum/maximum; if so
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       * pop it from U/L queues
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       */
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      if (state->rbuf->tail == deque_peek_front(state->maxque))
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        deque_pop_front(state->maxque);
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      else if (state->rbuf->tail == deque_peek_front(state->minque))
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        deque_pop_front(state->minque);
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      /* remove oldest element from ring buffer */
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      ringbuf_pop_back(state->rbuf);
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      --(state->k);
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    }
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  return GSL_SUCCESS;
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}
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static int
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mmacc_min(void * params, mmacc_type_t * result, const void * vstate)
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{
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  const mmacc_state_t * state = (const mmacc_state_t *) vstate;
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  (void) params;
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  if (state->k == 0)
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    {
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      GSL_ERROR ("no samples yet added to workspace", GSL_EINVAL);
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    }
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  else
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    {
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      *result = state->rbuf->array[deque_peek_front(state->minque)];
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      return GSL_SUCCESS;
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    }
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}
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static int
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mmacc_max(void * params, mmacc_type_t * result, const void * vstate)
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{
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  const mmacc_state_t * state = (const mmacc_state_t *) vstate;
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  (void) params;
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  if (state->k == 0)
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    {
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      GSL_ERROR ("no samples yet added to workspace", GSL_EINVAL);
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    }
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  else
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    {
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      *result = state->rbuf->array[deque_peek_front(state->maxque)];
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      return GSL_SUCCESS;
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    }
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}
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static int
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mmacc_minmax(void * params, mmacc_type_t * result, const void * vstate)
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{
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  const mmacc_state_t * state = (const mmacc_state_t *) vstate;
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  (void) params;
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  if (state->k == 0)
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    {
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      GSL_ERROR ("no samples yet added to workspace", GSL_EINVAL);
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    }
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  else
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    {
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      result[0] = state->rbuf->array[deque_peek_front(state->minque)];
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      result[1] = state->rbuf->array[deque_peek_front(state->maxque)];
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      return GSL_SUCCESS;
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    }
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}
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static const gsl_movstat_accum min_accum_type =
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{
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  mmacc_size,
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  mmacc_init,
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  mmacc_insert,
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  mmacc_delete,
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  mmacc_min
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};
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const gsl_movstat_accum *gsl_movstat_accum_min = &min_accum_type;
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static const gsl_movstat_accum max_accum_type =
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{
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  mmacc_size,
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  mmacc_init,
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  mmacc_insert,
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  mmacc_delete,
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  mmacc_max
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};
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const gsl_movstat_accum *gsl_movstat_accum_max = &max_accum_type;
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static const gsl_movstat_accum minmax_accum_type =
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{
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  mmacc_size,
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  mmacc_init,
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  mmacc_insert,
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  mmacc_delete,
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  mmacc_minmax
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};
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const gsl_movstat_accum *gsl_movstat_accum_minmax = &minmax_accum_type;