Blame histogram/stat.c

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/* gsl_histogram_stat.c
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 * Copyright (C) 2000  Simone Piccardi
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 *
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 * This library is free software; you can redistribute it and/or
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 * modify it under the terms of the GNU General Public License as
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 * published by the Free Software Foundation; either version 3 of the
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 * License, or (at your option) any later version.
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 *
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 * This program is distributed in the hope that it will be useful,
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 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
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 * General Public License for more details.
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 *
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 * You should have received a copy of the GNU General Public License along
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 * with this library; if not, write to the Free Software Foundation, Inc.,
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 * 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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 */
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/***************************************************************
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 *
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 * File gsl_histogram_stat.c: 
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 * Routines for statisticalcomputations on histograms. 
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 * Need GSL library and header.
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 * Contains the routines:
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 * gsl_histogram_mean    compute histogram mean
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 * gsl_histogram_sigma   compute histogram sigma
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 *
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 * Author: S. Piccardi
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 * Jan. 2000
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 *
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 ***************************************************************/
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#include <config.h>
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#include <stdlib.h>
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#include <math.h>
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#include <gsl/gsl_errno.h>
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#include <gsl/gsl_histogram.h>
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/* FIXME: We skip negative values in the histogram h->bin[i] < 0,
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   since those correspond to negative weights (BJG) */
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double
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gsl_histogram_mean (const gsl_histogram * h)
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{
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  const size_t n = h->n;
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  size_t i;
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  /* Compute the bin-weighted arithmetic mean M of a histogram using the
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     recurrence relation
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     M(n) = M(n-1) + (x[n] - M(n-1)) (w(n)/(W(n-1) + w(n))) 
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     W(n) = W(n-1) + w(n)
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   */
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  long double wmean = 0;
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  long double W = 0;
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  for (i = 0; i < n; i++)
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    {
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      double xi = (h->range[i + 1] + h->range[i]) / 2;
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      double wi = h->bin[i];
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      if (wi > 0)
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        {
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          W += wi;
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          wmean += (xi - wmean) * (wi / W);
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        }
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    }
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  return wmean;
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}
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double
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gsl_histogram_sigma (const gsl_histogram * h)
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{
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  const size_t n = h->n;
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  size_t i;
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  long double wvariance = 0 ;
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  long double wmean = 0;
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  long double W = 0;
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  /* Use a two-pass algorithm for stability.  Could also use a single
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     pass formula, as given in N.J.Higham 'Accuracy and Stability of
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     Numerical Methods', p.12 */
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  /* Compute the mean */
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  for (i = 0; i < n; i++)
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    {
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      double xi = (h->range[i + 1] + h->range[i]) / 2;
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      double wi = h->bin[i];
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      if (wi > 0)
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        {
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          W += wi;
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          wmean += (xi - wmean) * (wi / W);
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        }
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    }
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  /* Compute the variance */
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  W = 0.0;
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  for (i = 0; i < n; i++)
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    {
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      double xi = ((h->range[i + 1]) + (h->range[i])) / 2;
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      double wi = h->bin[i];
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      if (wi > 0) {
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        const long double delta = (xi - wmean);
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        W += wi ;
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        wvariance += (delta * delta - wvariance) * (wi / W);
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      }
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    }
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  {
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    double sigma = sqrt (wvariance) ;
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    return sigma;
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  }
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}
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/*
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  sum up all bins of histogram
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 */
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double 
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gsl_histogram_sum(const gsl_histogram * h)
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{
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  double sum=0;
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  size_t i=0;
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  size_t n;
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  n=h->n;
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  while(i < n)
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    sum += h->bin[i++];
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  return sum;
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}
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